Integrative Orthology Viewer: PT01G24690 (Populus trichocarpa)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Populus trichocarpa | Orthologous gene family | PT01G10460 PT01G10610 PT01G24690 ... | 16 | |
Anchor point | PT06G09500 PT09G04020 PT16G10730 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | PT01G24690 | 1 | ||
Tree-based ortholog | PT01G24690 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-many | ATR_00009G02590 ATR_00009G02800 ATR_00029G02560 ... | 5 | |
Anchor point | many-to-1 | ATR_00029G02560 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00029G02560 | 1 | ||
Tree-based ortholog | 1-to-1 | ATR_00029G02560 | 1 | ||
Arabidopsis lyrata | Anchor point | many-to-many | AL4G14060 AL5G15480 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL5G15480 | 1 | ||
Tree-based ortholog | 1-to-many | AL5G15480 AL8G29170 | 2 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT1G20010 AT1G75780 AT2G29550 ... | 8 | |
Anchor point | many-to-1 | AT2G29550 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | AT5G62690 AT5G62700 | 2 | ||
Tree-based ortholog | 1-to-many | AT5G62690 AT5G62700 | 2 | ||
Beta vulgaris | Orthologous gene family | many-to-many | BV0G62030 BV5G07470 BV7G05690 | 3 | |
Anchor point | many-to-1 | BV7G05690 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV7G05690 | 1 | ||
Tree-based ortholog | 1-to-1 | BV7G05690 | 1 | ||
Brassica rapa | Anchor point | many-to-many | BR05G13930 BR04G17250 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | BR06G20370 BR06G29260 | 2 | ||
Tree-based ortholog | 1-to-many | BR06G20370 BR06G29260 BR01G22750 ... | 4 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_001G18720 CRU_002G21340 CRU_004G10320 ... | 8 | |
Anchor point | many-to-many | CRU_004G10320 CRU_005G12310 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_006G20910 | 1 | ||
Tree-based ortholog | 1-to-many | CRU_005G12350 CRU_005G12310 | 2 | ||
Carica papaya | Anchor point | many-to-many | CP00056G00740 CP00112G00880 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00074G00110 | 1 | ||
Tree-based ortholog | 1-to-1 | CP00112G00880 | 1 | ||
Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | CR12G16830 CR12G15170 | 2 | |
Tree-based ortholog | 1-to-many | CR03G10780 CR04G00210 CR06G13080 ... | 8 | ||
Citrullus lanatus | Orthologous gene family | many-to-many | CL01G02540 CL03G07950 CL04G07290 ... | 6 | |
Anchor point | many-to-1 | CL10G19630 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL04G07290 | 1 | ||
Tree-based ortholog | 1-to-1 | CL04G07290 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-many | CS00009G00910 CS00010G00180 CS00026G00550 ... | 5 | |
Anchor point | many-to-many | CS00026G00550 CS00083G00500 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00026G00550 | 1 | ||
Tree-based ortholog | 1-to-1 | CS00026G00550 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-many | CM00001G02250 CM00001G09620 CM00005G06460 ... | 5 | |
Anchor point | many-to-many | CM00011G01230 CM00002G01610 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00011G01230 | 1 | ||
Tree-based ortholog | 1-to-many | CM00011G01230 CM00024G01330 | 2 | ||
Eucalyptus grandis | Anchor point | many-to-1 | EG0002G18170 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0002G18170 | 1 | ||
Tree-based ortholog | 1-to-1 | EG0002G18170 | 1 | ||
Fragaria vesca | Anchor point | many-to-1 | FV6G11430 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV7G38520 | 1 | ||
Tree-based ortholog | 1-to-1 | FV7G38520 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM01G26950 GM03G15020 GM04G02610 ... | 16 | |
Anchor point | many-to-many | GM01G26950 GM03G15020 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM20G29840 GM10G37960 | 2 | ||
Tree-based ortholog | 1-to-many | GM01G26950 GM03G15020 | 2 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR02G12340 GR03G12630 GR03G15910 ... | 17 | |
Anchor point | many-to-many | GR09G09460 GR13G26130 GR03G12630 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR04G21060 | 1 | ||
Tree-based ortholog | 1-to-many | GR03G12630 GR13G26130 GR09G09460 ... | 4 | ||
Lotus japonicus | Orthologous gene family | many-to-many | LJ4G004770 LJ4G045730 LJ4G051290 ... | 5 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ5G033380 | 1 | ||
Tree-based ortholog | 1-to-1 | LJ1G056730 | 1 | ||
Malus domestica | Anchor point | many-to-many | MD12G016690 MD03G005890 MD04G011600 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD01G019160 MD07G018570 | 2 | ||
Tree-based ortholog | 1-to-many | MD12G016690 MD00G445750 MD04G011600 | 3 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME02765G00090 ME02960G00340 ME03150G00640 ... | 12 | |
Anchor point | many-to-many | ME03651G00300 ME06512G02830 ME03150G00640 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME11425G00080 | 1 | ||
Tree-based ortholog | 1-to-many | ME03150G00640 ME06512G02830 | 2 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT1G101130 MT2G031310 MT3G113970 ... | 9 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT1G101130 | 1 | ||
Tree-based ortholog | 1-to-many | MT1G101130 MT4G019110 MT4G019090 | 3 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS02G07060 OS03G01530 OS03G45920 ... | 5 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS03G01530 | 1 | ||
Tree-based ortholog | 1-to-1 | OS03G01530 | 1 | ||
Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL01G04460 | 1 | |
Tree-based ortholog | 1-to-many | OL08G03660 OL12G01340 OL02G02120 ... | 6 | ||
Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00218G00030 PP00252G00350 PP00093G00690 ... | 6 | |
Tree-based ortholog | 1-to-many | PP00215G00280 PP00215G00270 PP00341G00090 ... | 29 | ||
Prunus persica | Anchor point | many-to-many | PPE_006G00980 PPE_006G27520 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_002G28240 | 1 | ||
Tree-based ortholog | 1-to-many | PPE_006G27520 PPE_007G03680 | 2 | ||
Ricinus communis | Orthologous gene family | many-to-many | RC27798G00230 RC28102G00020 RC29751G00270 ... | 8 | |
Anchor point | many-to-many | RC29751G00270 RC27798G00230 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30190G03620 | 1 | ||
Tree-based ortholog | 1-to-1 | RC29751G00270 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL03G025730 SL03G118760 SL04G081490 ... | 9 | |
Anchor point | many-to-1 | SL06G076640 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL10G086760 | 1 | ||
Tree-based ortholog | 1-to-1 | SL03G025730 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST03G014260 ST03G032250 ST04G034870 ... | 9 | |
Anchor point | many-to-many | ST10G023800 ST10G027750 ST06G032430 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST10G027750 | 1 | ||
Tree-based ortholog | 1-to-1 | ST03G014260 | 1 | ||
Thellungiella parvula | Anchor point | many-to-many | TP5G14830 TP4G12280 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP5G14830 | 1 | ||
Tree-based ortholog | 1-to-many | TP2G25870 TP5G14830 | 2 | ||
Theobroma cacao | Orthologous gene family | many-to-many | TC0003G05420 TC0003G17890 TC0003G27280 ... | 11 | |
Anchor point | many-to-many | TC0009G30400 TC0005G02390 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0003G17890 | 1 | ||
Tree-based ortholog | 1-to-many | TC0009G30400 TC0005G02390 | 2 | ||
Vitis vinifera | Orthologous gene family | many-to-1 | VV08G03620 | 1 | |
Anchor point | many-to-1 | VV06G02480 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV02G06500 | 1 | ||
Tree-based ortholog | 1-to-1 | VV08G03620 | 1 | ||
Zea mays | Orthologous gene family | many-to-many | ZM01G00500 ZM01G48220 ZM01G52790 ... | 6 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM01G00500 | 1 | ||
Tree-based ortholog | 1-to-1 | ZM01G00500 | 1 |