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Integrative Orthology Viewer:
PT00G16090
(Populus trichocarpa)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Populus trichocarpa | Orthologous gene family | PT00G16090 PT01G23690 | 2 |  |
| Best-Hits-and-Inparalogs(BHI)family | PT00G16090 | 1 | ||
| Tree-based ortholog | PT00G16090 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00012G00060 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00012G00060 | 1 | ||
| Tree-based ortholog | 1-to-1 | ATR_00012G00060 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | many-to-1 | AL8G26130 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL8G26130 | 1 | ||
| Tree-based ortholog | 1-to-many | AL7G34850 AL2G13270 AL6G01700 ... | 4 | ||
| Arabidopsis thaliana | Orthologous gene family | many-to-1 | AT5G59950 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT5G59950 | 1 | ||
| Tree-based ortholog | 1-to-many | AT5G37720 AT1G66260 AT5G02530 ... | 4 | ||
| Beta vulgaris | Orthologous gene family | many-to-1 | BV7G06940 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV7G06940 | 1 | ||
| Tree-based ortholog | 1-to-many | BV0G40240 BV0G23240 BV7G06940 | 3 | ||
| Brassica rapa | Orthologous gene family | many-to-many | BR02G11860 BR10G12640 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR10G12640 | 1 | ||
| Tree-based ortholog | 1-to-many | BR04G07870 BR07G23980 BR03G00720 ... | 6 | ||
| Capsella rubella | Orthologous gene family | many-to-1 | CRU_008G19940 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_008G19940 | 1 | ||
| Tree-based ortholog | 1-to-many | CRU_007G31500 CRU_002G11480 CRU_006G01300 ... | 4 | ||
| Carica papaya | Orthologous gene family | many-to-many | CP00188G00080 CP00190G00140 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00188G00080 | 1 | ||
| Tree-based ortholog | 1-to-1 | CP00188G00080 | 1 | ||
| Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR10G09660 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR10G09660 | 1 | ||
| Tree-based ortholog | 1-to-1 | CR10G09660 | 1 | ||
| Citrullus lanatus | Orthologous gene family | many-to-many | CL02G20550 CL03G02000 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL03G02000 | 1 | ||
| Tree-based ortholog | 1-to-1 | CL03G02000 | 1 | ||
| Citrus sinensis | Orthologous gene family | many-to-1 | CS00014G00800 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00014G00800 | 1 | ||
| Tree-based ortholog | 1-to-1 | CS00014G00800 | 1 | ||
| Cucumis melo | Orthologous gene family | many-to-many | CM00020G02410 CM00044G02500 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00044G02500 | 1 | ||
| Tree-based ortholog | 1-to-1 | CM00044G02500 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0002G19150 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0002G19150 | 1 | ||
| Tree-based ortholog | 1-to-1 | EG0002G19150 | 1 | ||
| Fragaria vesca | Orthologous gene family | many-to-1 | FV0G31530 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV0G31530 | 1 | ||
| Tree-based ortholog | 1-to-1 | FV0G31530 | 1 | ||
| Glycine max | Orthologous gene family | many-to-many | GM11G15040 GM12G07010 GM13G40930 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM11G15040 GM12G07010 | 2 | ||
| Tree-based ortholog | 1-to-many | GM12G07010 GM11G15040 GM13G40930 | 3 | ||
| Gossypium raimondii | Orthologous gene family | many-to-many | GR01G10850 GR03G13520 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GR01G10850 GR03G13520 | 2 | ||
| Tree-based ortholog | 1-to-many | GR04G00430 GR01G10850 GR13G26460 ... | 4 | ||
| Lotus japonicus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ1G040740 | 1 | |
| Tree-based ortholog | 1-to-1 | LJ1G040740 | 1 | ||
| Malus domestica | Orthologous gene family | many-to-many | MD00G042530 MD00G285810 MD00G469440 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD00G042530 MD00G469440 | 2 | ||
| Tree-based ortholog | 1-to-many | MD00G469440 MD00G042530 MD00G285810 ... | 4 | ||
| Manihot esculenta | Orthologous gene family | many-to-many | ME08847G00080 ME10045G00010 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME10045G00010 ME08847G00080 | 2 | ||
| Tree-based ortholog | 1-to-many | ME10045G00010 ME08847G00080 | 2 | ||
| Medicago truncatula | Orthologous gene family | many-to-1 | MT4G063557 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT4G063557 | 1 | ||
| Tree-based ortholog | 1-to-1 | MT4G063557 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS03G17010 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS03G17010 | 1 | ||
| Tree-based ortholog | 1-to-many | OS08G33120 OS06G14470 OS07G13280 ... | 6 | ||
| Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL20G00730 | 1 | |
| Tree-based ortholog | 1-to-1 | OL20G00730 | 1 | ||
| Physcomitrella patens | Orthologous gene family | many-to-many | PP00004G00350 PP00057G00750 PP00077G00650 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00057G00750 PP00004G00350 PP00077G00650 ... | 4 | ||
| Tree-based ortholog | 1-to-many | PP00390G00130 PP00077G00650 PP00004G00350 ... | 4 | ||
| Prunus persica | Orthologous gene family | many-to-1 | PPE_006G08020 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_006G08020 | 1 | ||
| Tree-based ortholog | 1-to-1 | PPE_006G08020 | 1 | ||
| Ricinus communis | Orthologous gene family | many-to-1 | RC29876G00160 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29876G00160 | 1 | ||
| Tree-based ortholog | 1-to-1 | RC29876G00160 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-1 | SL11G073280 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL11G073280 | 1 | ||
| Tree-based ortholog | 1-to-many | SL04G014460 SL11G011130 SL11G073280 ... | 4 | ||
| Solanum tuberosum | Orthologous gene family | many-to-1 | ST11G030240 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST11G030240 | 1 | ||
| Tree-based ortholog | 1-to-many | ST04G011530 ST11G008360 ST11G030240 ... | 4 | ||
| Thellungiella parvula | Orthologous gene family | many-to-1 | TP6G21630 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP6G21630 | 1 | ||
| Tree-based ortholog | 1-to-many | TP7G04340 TP5G21330 TP6G39980 ... | 4 | ||
| Theobroma cacao | Orthologous gene family | many-to-many | TC0005G04100 TC0009G32030 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0005G04100 | 1 | ||
| Tree-based ortholog | 1-to-1 | TC0005G04100 | 1 | ||
| Vitis vinifera | Orthologous gene family | many-to-1 | VV06G03960 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV06G03960 | 1 | ||
| Tree-based ortholog | 1-to-1 | VV06G03960 | 1 | ||
| Zea mays | Orthologous gene family | many-to-many | ZM01G11530 ZM09G23700 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM01G11530 ZM09G23700 | 2 | ||
| Tree-based ortholog | 1-to-many | ZM04G13740 ZM06G17680 ZM02G26530 ... | 6 |