Integrative Orthology Viewer: PT00G00280 (Populus trichocarpa)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Populus trichocarpa | Orthologous gene family | PT00G00280 PT11G11510 PT17G01380 ... | 7 | |
Best-Hits-and-Inparalogs(BHI)family | PT07G13800 PT00G00280 | 2 | ||
Tree-based ortholog | PT00G00270 PT00G00280 | 2 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ATR_00127G00100 | 1 | |
Tree-based ortholog | many-to-1 | ATR_00389G00030 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-1 | AL7G33200 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AL8G19000 | 1 | ||
Tree-based ortholog | many-to-many | AL7G33200 AL7G18590 AL7G18580 ... | 6 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-1 | AT5G36160 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT5G53970 | 1 | ||
Tree-based ortholog | many-to-many | AT5G36160 AT4G23590 AT4G23600 ... | 7 | ||
Beta vulgaris | Orthologous gene family | many-to-1 | BV0G69040 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | BV0G69040 BV5G18200 | 2 | ||
Tree-based ortholog | many-to-1 | BV5G18200 | 1 | ||
Brassica rapa | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BR02G15460 | 1 | |
Tree-based ortholog | many-to-many | BR09G45150 BR05G15880 BR03G47270 ... | 18 | ||
Capsella rubella | Orthologous gene family | many-to-1 | CRU_007G30490 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRU_008G13940 | 1 | ||
Tree-based ortholog | many-to-many | CRU_007G30490 CRU_007G16660 CRU_007G16640 ... | 7 | ||
Carica papaya | Orthologous gene family | many-to-many | CP00083G00800 CP00131G00870 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00083G00800 | 1 | ||
Tree-based ortholog | many-to-many | CP00083G00800 CP00083G00820 | 2 | ||
Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR02G11860 | 1 | |
Tree-based ortholog | many-to-1 | CR01G10300 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-many | CL02G17970 CL11G11730 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL11G11730 | 1 | ||
Tree-based ortholog | many-to-many | CL02G17950 CL02G17970 | 2 | ||
Citrus sinensis | Orthologous gene family | many-to-many | CS00245G00100 CS00536G00080 CS00536G00090 ... | 5 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS04685G00010 | 1 | ||
Tree-based ortholog | many-to-many | CS00536G00110 CS00536G00090 CS00536G00080 ... | 7 | ||
Cucumis melo | Orthologous gene family | many-to-many | CM00020G01340 CM00081G00230 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00081G00230 | 1 | ||
Tree-based ortholog | many-to-1 | CM00020G01340 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-many | EG0001G15210 EG0001G15260 EG0001G15290 ... | 5 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | EG0001G15260 EG0001G15290 EG0001G15320 | 3 | ||
Tree-based ortholog | many-to-many | EG0001G15260 EG0001G15290 EG0001G15320 ... | 4 | ||
Fragaria vesca | Orthologous gene family | many-to-many | FV2G01390 FV6G21820 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FV6G21820 | 1 | ||
Tree-based ortholog | many-to-1 | FV6G21830 | 1 | ||
Glycine max | Orthologous gene family | many-to-1 | GM12G33350 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GM06G35585 | 1 | ||
Tree-based ortholog | many-to-many | GM13G37071 GM12G33350 GM13G37080 | 3 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR05G19990 GR05G20010 GR13G07590 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | GR05G20010 GR05G19990 | 2 | ||
Tree-based ortholog | many-to-many | GR13G07590 GR05G20010 GR05G19990 | 3 | ||
Lotus japonicus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | LJ3G004940 | 1 | |
Tree-based ortholog | many-to-1 | LJ3G004940 | 1 | ||
Malus domestica | Orthologous gene family | many-to-1 | MD17G017680 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MD17G017680 | 1 | ||
Tree-based ortholog | many-to-1 | MD00G223910 | 1 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME02307G00310 ME03850G00150 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ME02307G00310 | 1 | ||
Tree-based ortholog | many-to-1 | ME02307G00300 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-1 | MT2G090615 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MT8G061360 | 1 | ||
Tree-based ortholog | many-to-1 | MT2G090615 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS02G19970 OS02G20360 OS11G35040 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | OS02G20360 OS02G19970 | 2 | ||
Tree-based ortholog | many-to-many | OS11G35040 OS02G19924 OS02G20360 ... | 5 | ||
Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL01G04610 | 1 | |
Tree-based ortholog | many-to-1 | OL01G04610 | 1 | ||
Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PP00121G00630 | 1 | |
Tree-based ortholog | many-to-1 | PP00121G00630 | 1 | ||
Prunus persica | Orthologous gene family | many-to-many | PPE_004G16710 PPE_009G01260 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPE_009G01260 | 1 | ||
Tree-based ortholog | many-to-many | PPE_009G01260 PPE_009G01280 | 2 | ||
Ricinus communis | Orthologous gene family | many-to-many | RC29705G00350 RC29983G00420 RC29983G00430 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC29983G00430 | 1 | ||
Tree-based ortholog | many-to-1 | RC29983G00430 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL07G053710 SL07G053720 SL10G008200 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL07G053720 | 1 | ||
Tree-based ortholog | many-to-many | SL07G053710 SL10G008200 | 2 | ||
Solanum tuberosum | Orthologous gene family | many-to-1 | ST10G008680 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST10G008680 | 1 | ||
Tree-based ortholog | many-to-many | ST07G021530 ST10G008680 | 2 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP4G03870 TP4G03940 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP6G16050 | 1 | ||
Tree-based ortholog | many-to-many | TP3G33850 TP7G06030 TP7G21510 ... | 11 | ||
Theobroma cacao | Orthologous gene family | many-to-many | TC0002G17890 TC0002G17900 TC0002G17950 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TC0002G17950 | 1 | ||
Tree-based ortholog | many-to-1 | TC0002G17950 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-many | VV12G01870 VV12G01900 VV12G01930 ... | 5 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV12G01940 | 1 | ||
Tree-based ortholog | many-to-many | VV12G01900 VV12G01930 VV12G01870 ... | 8 | ||
Zea mays | Orthologous gene family | many-to-many | ZM04G35520 ZM05G27920 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM04G34220 | 1 | ||
Tree-based ortholog | many-to-many | ZM02G43340 ZM04G34220 ZM04G35520 ... | 4 |