Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
PPE_004G13100
(Prunus persica)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Prunus persica | Orthologous gene family | PPE_004G13100 | 1 |  |
| Best-Hits-and-Inparalogs(BHI)family | PPE_004G13100 | 1 | ||
| Tree-based ortholog | PPE_004G13100 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00059G02520 | 1 | |
| Tree-based ortholog | 1-to-1 | ATR_00059G02520 | 1 | ||
| Arabidopsis lyrata | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL8G03830 | 1 | |
| Tree-based ortholog | 1-to-many | AL8G03830 AL7G22950 | 2 | ||
| Arabidopsis thaliana | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT5G45190 | 1 | |
| Tree-based ortholog | 1-to-many | AT5G45190 AT4G19600 | 2 | ||
| Beta vulgaris | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV3G15610 | 1 | |
| Tree-based ortholog | 1-to-1 | BV3G15610 | 1 | ||
| Brassica rapa | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR06G37630 | 1 | |
| Tree-based ortholog | 1-to-many | BR02G27780 BR06G37630 BR08G11920 ... | 4 | ||
| Capsella rubella | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_008G02890 | 1 | |
| Tree-based ortholog | 1-to-many | CRU_008G02890 CRU_007G20620 | 2 | ||
| Carica papaya | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00882G00010 | 1 | |
| Tree-based ortholog | 1-to-1 | CP00882G00010 | 1 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR14G01330 | 1 | |
| Tree-based ortholog | 1-to-many | CR07G02100 CR14G01330 CR10G07660 | 3 | ||
| Citrullus lanatus | Orthologous gene family | 1-to-1 | CL02G18770 | 1 | |
| Anchor point | N/A | CL02G18770 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL02G18770 | 1 | ||
| Tree-based ortholog | 1-to-many | CL01G15640 CL02G18770 | 2 | ||
| Citrus sinensis | Anchor point | N/A | CS00052G00850 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00008G02720 | 1 | ||
| Tree-based ortholog | 1-to-many | CS00008G02720 CS00052G00850 | 2 | ||
| Cucumis melo | Anchor point | N/A | CM00039G00760 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00039G00760 | 1 | ||
| Tree-based ortholog | 1-to-many | CM00049G01280 CM00039G00760 | 2 | ||
| Eucalyptus grandis | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0005G15440 | 1 | |
| Tree-based ortholog | 1-to-1 | EG0005G15440 | 1 | ||
| Fragaria vesca | Anchor point | N/A | FV3G17270 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV3G17270 | 1 | ||
| Tree-based ortholog | 1-to-many | FV3G17270 FV3G17280 FV5G40080 | 3 | ||
| Glycine max | Anchor point | N/A | GM15G41040 GM08G17960 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM15G41040 GM08G17960 | 2 | ||
| Tree-based ortholog | 1-to-many | GM20G02860 GM07G35010 GM20G02880 ... | 6 | ||
| Gossypium raimondii | Anchor point | N/A | GR11G05130 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR11G05130 | 1 | ||
| Tree-based ortholog | 1-to-many | GR11G05130 GR06G09160 | 2 | ||
| Lotus japonicus | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | LJ3G003660 LJ3G003670 | 2 | |
| Tree-based ortholog | 1-to-many | LJ4G013750 LJ3G003660 LJ3G003670 | 3 | ||
| Malus domestica | Anchor point | N/A | MD05G011000 MD10G016730 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD10G016740 | 1 | ||
| Tree-based ortholog | 1-to-1 | MD10G016740 | 1 | ||
| Manihot esculenta | Anchor point | N/A | ME03115G00070 ME02477G00090 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME02477G00090 | 1 | ||
| Tree-based ortholog | 1-to-many | ME02477G00090 ME03115G00070 | 2 | ||
| Medicago truncatula | Anchor point | N/A | MT2G068690 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT2G068690 | 1 | ||
| Tree-based ortholog | 1-to-many | MT7G094060 MT7G094070 MT4G083690 ... | 4 | ||
| Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS12G30020 | 1 | |
| Tree-based ortholog | 1-to-1 | OS12G30020 | 1 | ||
| Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | OL02G04640 OL02G04630 | 2 | |
| Tree-based ortholog | 1-to-many | OL02G04640 OL02G04630 | 2 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00086G00700 PP00119G00610 PP00264G00100 ... | 4 | |
| Tree-based ortholog | 1-to-many | PP00080G01090 PP00264G00100 PP00119G00610 ... | 4 | ||
| Populus trichocarpa | Anchor point | N/A | PT07G06710 PT03G14880 PT05G09740 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT07G06710 PT05G09740 | 2 | ||
| Tree-based ortholog | 1-to-many | PT05G09740 PT07G06710 PT03G14880 ... | 4 | ||
| Ricinus communis | Anchor point | N/A | RC30169G01060 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30169G01060 | 1 | ||
| Tree-based ortholog | 1-to-1 | RC30169G01060 | 1 | ||
| Solanum lycopersicum | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL10G078180 | 1 | |
| Tree-based ortholog | 1-to-1 | SL10G078180 | 1 | ||
| Solanum tuberosum | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST10G019590 | 1 | |
| Tree-based ortholog | 1-to-1 | ST10G019590 | 1 | ||
| Thellungiella parvula | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP2G10000 | 1 | |
| Tree-based ortholog | 1-to-many | TP2G10000 TP7G18170 | 2 | ||
| Theobroma cacao | Anchor point | N/A | TC0006G13430 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0006G13430 | 1 | ||
| Tree-based ortholog | 1-to-1 | TC0006G13430 | 1 | ||
| Vitis vinifera | Anchor point | N/A | VV19G07850 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV19G07850 | 1 | ||
| Tree-based ortholog | 1-to-many | VV00G21140 VV19G07850 | 2 | ||
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM01G01220 ZM10G21670 | 2 | |
| Tree-based ortholog | 1-to-many | ZM01G04540 ZM07G11730 ZM10G21670 ... | 4 |