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Integrative Orthology Viewer:
PP00341G00410
(Physcomitrella patens)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Physcomitrella patens | Orthologous gene family | PP00058G01100 PP00215G00140 PP00341G00410 | 3 |  |
| Anchor point | PP00215G00140 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | PP00341G00410 PP00058G01100 PP00215G00140 | 3 | ||
| Tree-based ortholog | PP00215G00140 PP00341G00410 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00203G00160 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ATR_00059G00460 | 1 | ||
| Tree-based ortholog | many-to-1 | ATR_00059G00460 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | many-to-1 | AL1G22940 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AL7G06520 | 1 | ||
| Tree-based ortholog | many-to-1 | AL7G06520 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | many-to-1 | AT1G21700 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT4G34430 | 1 | ||
| Tree-based ortholog | many-to-1 | AT4G34430 | 1 | ||
| Beta vulgaris | Orthologous gene family | many-to-1 | BV1G02110 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BV9G13660 | 1 | ||
| Tree-based ortholog | many-to-1 | BV9G13660 | 1 | ||
| Brassica rapa | Orthologous gene family | many-to-many | BR06G15860 BR08G24570 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BR01G03690 | 1 | ||
| Tree-based ortholog | many-to-1 | BR01G03690 | 1 | ||
| Capsella rubella | Orthologous gene family | many-to-1 | CRU_001G20260 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRU_007G05550 | 1 | ||
| Tree-based ortholog | many-to-1 | CRU_007G05550 | 1 | ||
| Carica papaya | Orthologous gene family | many-to-1 | CP00064G01200 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00062G01320 | 1 | ||
| Tree-based ortholog | many-to-1 | CP00062G01320 | 1 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR08G01970 | 1 | |
| Tree-based ortholog | many-to-1 | CR08G01970 | 1 | ||
| Citrullus lanatus | Orthologous gene family | many-to-1 | CL11G10010 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL11G10010 | 1 | ||
| Tree-based ortholog | many-to-many | CL02G05290 CL02G05300 | 2 | ||
| Citrus sinensis | Orthologous gene family | many-to-1 | CS00004G00460 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS00250G00180 | 1 | ||
| Tree-based ortholog | many-to-1 | CS00250G00180 | 1 | ||
| Cucumis melo | Orthologous gene family | many-to-1 | CM00013G01410 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00017G00370 | 1 | ||
| Tree-based ortholog | many-to-1 | CM00017G00370 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0006G32590 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | EG0009G10060 | 1 | ||
| Tree-based ortholog | many-to-1 | EG0009G10060 | 1 | ||
| Fragaria vesca | Orthologous gene family | many-to-1 | FV2G29950 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FV5G07070 | 1 | ||
| Tree-based ortholog | many-to-1 | FV5G07070 | 1 | ||
| Glycine max | Orthologous gene family | many-to-many | GM04G42601 GM06G12170 GM13G10120 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | GM11G12640 GM12G04840 | 2 | ||
| Tree-based ortholog | many-to-many | GM12G04840 GM11G12640 | 2 | ||
| Gossypium raimondii | Orthologous gene family | many-to-many | GR05G08850 GR09G28400 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GR05G24260 | 1 | ||
| Tree-based ortholog | many-to-many | GR05G24260 GR12G15240 | 2 | ||
| Lotus japonicus | Orthologous gene family | many-to-1 | LJ1G012030 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | LJ1G044260 | 1 | ||
| Tree-based ortholog | many-to-many | LJ1G044260 LJ1G021070 | 2 | ||
| Malus domestica | Orthologous gene family | many-to-many | MD00G183140 MD00G359550 MD15G026800 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | MD00G128520 MD14G004660 | 2 | ||
| Tree-based ortholog | many-to-many | MD00G128520 MD14G004660 | 2 | ||
| Manihot esculenta | Orthologous gene family | many-to-many | ME04314G00020 ME07238G00490 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ME00325G00130 | 1 | ||
| Tree-based ortholog | many-to-1 | ME00325G00130 | 1 | ||
| Medicago truncatula | Orthologous gene family | many-to-1 | MT3G088480 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MT4G069830 | 1 | ||
| Tree-based ortholog | many-to-1 | MT4G069830 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS11G08080 OS12G07730 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS03G51220 | 1 | ||
| Tree-based ortholog | many-to-many | OS03G51220 OS04G01970 | 2 | ||
| Ostreococcus lucimarinus | Orthologous gene family | many-to-1 | OL13G00230 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL13G00230 | 1 | ||
| Tree-based ortholog | many-to-1 | OL13G00230 | 1 | ||
| Populus trichocarpa | Orthologous gene family | many-to-many | PT02G08060 PT05G18080 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | PT09G11490 PT04G15330 | 2 | ||
| Tree-based ortholog | many-to-many | PT09G11490 PT04G15330 | 2 | ||
| Prunus persica | Orthologous gene family | many-to-1 | PPE_001G49740 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPE_008G11700 | 1 | ||
| Tree-based ortholog | many-to-1 | PPE_008G11700 | 1 | ||
| Ricinus communis | Orthologous gene family | many-to-1 | RC29648G00920 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC30190G00560 | 1 | ||
| Tree-based ortholog | many-to-1 | RC30190G00560 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-1 | SL06G060120 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL01G109510 | 1 | ||
| Tree-based ortholog | many-to-1 | SL01G109510 | 1 | ||
| Solanum tuberosum | Orthologous gene family | many-to-1 | ST06G017850 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST01G046890 | 1 | ||
| Tree-based ortholog | many-to-1 | ST01G046890 | 1 | ||
| Thellungiella parvula | Orthologous gene family | many-to-1 | TP1G19260 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP7G32230 | 1 | ||
| Tree-based ortholog | many-to-1 | TP7G32230 | 1 | ||
| Theobroma cacao | Orthologous gene family | many-to-1 | TC0008G12560 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TC0002G08280 | 1 | ||
| Tree-based ortholog | many-to-1 | TC0002G08280 | 1 | ||
| Vitis vinifera | Orthologous gene family | many-to-1 | VV18G01820 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV03G08350 | 1 | ||
| Tree-based ortholog | many-to-1 | VV03G08350 | 1 | ||
| Zea mays | Orthologous gene family | many-to-1 | ZM04G33720 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM01G51190 | 1 | ||
| Tree-based ortholog | many-to-many | ZM01G51190 ZM02G21690 | 2 |