Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
PP00254G00050
(Physcomitrella patens)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | PP00003G02050 PP00027G00490 PP00254G00050 | 3 |  |
| Orthologous gene family | PP00003G02050 PP00027G00490 PP00254G00050 | 3 | ||
| Tree-based ortholog | PP00027G00490 PP00003G02050 PP00254G00050 | 3 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ATR_00001G01210 | 1 | |
| Orthologous gene family | many-to-1 | ATR_00001G01210 | 1 | ||
| Tree-based ortholog | many-to-1 | ATR_00001G01210 | 1 | ||
| Arabidopsis lyrata | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AL2G24980 | 1 | |
| Orthologous gene family | many-to-many | AL1G21370 AL2G24980 | 2 | ||
| Tree-based ortholog | many-to-many | AL1G21370 AL2G24980 | 2 | ||
| Arabidopsis thaliana | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT1G76100 | 1 | |
| Orthologous gene family | many-to-many | AT1G20340 AT1G76100 | 2 | ||
| Tree-based ortholog | many-to-many | AT1G20340 AT1G76100 | 2 | ||
| Beta vulgaris | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BV0G36130 | 1 | |
| Orthologous gene family | many-to-1 | BV0G36130 | 1 | ||
| Tree-based ortholog | many-to-1 | BV0G36130 | 1 | ||
| Brassica rapa | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BR08G25180 | 1 | |
| Orthologous gene family | many-to-many | BR07G10450 BR08G25180 | 2 | ||
| Tree-based ortholog | many-to-many | BR08G25180 BR06G14680 BR07G10450 ... | 4 | ||
| Capsella rubella | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRU_001G19030 | 1 | |
| Orthologous gene family | many-to-1 | CRU_001G19030 | 1 | ||
| Tree-based ortholog | many-to-1 | CRU_001G19030 | 1 | ||
| Carica papaya | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00026G02580 | 1 | |
| Orthologous gene family | many-to-1 | CP00026G02580 | 1 | ||
| Tree-based ortholog | many-to-1 | CP00026G02580 | 1 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR03G09110 | 1 | |
| Orthologous gene family | many-to-1 | CR03G09110 | 1 | ||
| Tree-based ortholog | many-to-1 | CR03G09110 | 1 | ||
| Citrullus lanatus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL05G16680 | 1 | |
| Orthologous gene family | many-to-1 | CL05G16680 | 1 | ||
| Tree-based ortholog | many-to-1 | CL05G16680 | 1 | ||
| Citrus sinensis | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS00002G06100 | 1 | |
| Orthologous gene family | many-to-1 | CS00002G06100 | 1 | ||
| Tree-based ortholog | many-to-1 | CS00002G06100 | 1 | ||
| Cucumis melo | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM01596G04450 | 1 | |
| Orthologous gene family | many-to-1 | CM01596G04450 | 1 | ||
| Tree-based ortholog | many-to-1 | CM01596G04450 | 1 | ||
| Fragaria vesca | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FV2G37840 | 1 | |
| Orthologous gene family | many-to-1 | FV2G37840 | 1 | ||
| Tree-based ortholog | many-to-1 | FV2G37840 | 1 | ||
| Glycine max | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GM04G02240 | 1 | |
| Orthologous gene family | many-to-many | GM04G02240 GM06G02300 | 2 | ||
| Tree-based ortholog | many-to-many | GM06G02300 GM04G02240 | 2 | ||
| Gossypium raimondii | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GR09G19080 | 1 | |
| Orthologous gene family | many-to-1 | GR09G19080 | 1 | ||
| Tree-based ortholog | many-to-1 | GR09G19080 | 1 | ||
| Lotus japonicus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | LJ1G030240 | 1 | |
| Orthologous gene family | many-to-1 | LJ1G030240 | 1 | ||
| Tree-based ortholog | many-to-1 | LJ1G030240 | 1 | ||
| Malus domestica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MD12G014320 | 1 | |
| Orthologous gene family | many-to-1 | MD12G014320 | 1 | ||
| Tree-based ortholog | many-to-many | MD12G014320 MD00G323000 | 2 | ||
| Manihot esculenta | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ME09683G00030 | 1 | |
| Orthologous gene family | many-to-1 | ME09683G00030 | 1 | ||
| Tree-based ortholog | many-to-1 | ME09683G00030 | 1 | ||
| Medicago truncatula | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MT3G114850 | 1 | |
| Orthologous gene family | many-to-1 | MT3G114850 | 1 | ||
| Tree-based ortholog | many-to-1 | MT3G114850 | 1 | ||
| Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS06G01210 | 1 | |
| Orthologous gene family | many-to-1 | OS06G01210 | 1 | ||
| Tree-based ortholog | many-to-1 | OS06G01210 | 1 | ||
| Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL09G03930 | 1 | |
| Orthologous gene family | many-to-1 | OL09G03930 | 1 | ||
| Tree-based ortholog | many-to-1 | OL09G03930 | 1 | ||
| Populus trichocarpa | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PT02G01600 PT05G24610 | 2 | |
| Orthologous gene family | many-to-many | PT02G01600 PT05G24610 | 2 | ||
| Tree-based ortholog | many-to-many | PT05G24610 PT02G01600 | 2 | ||
| Prunus persica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPE_001G36740 | 1 | |
| Orthologous gene family | many-to-1 | PPE_001G36740 | 1 | ||
| Tree-based ortholog | many-to-1 | PPE_001G36740 | 1 | ||
| Ricinus communis | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC30170G06110 | 1 | |
| Orthologous gene family | many-to-1 | RC30170G06110 | 1 | ||
| Tree-based ortholog | many-to-1 | RC30170G06110 | 1 | ||
| Solanum lycopersicum | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL04G082010 | 1 | |
| Orthologous gene family | many-to-1 | SL04G082010 | 1 | ||
| Tree-based ortholog | many-to-1 | SL04G082010 | 1 | ||
| Solanum tuberosum | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST04G035400 | 1 | |
| Orthologous gene family | many-to-1 | ST04G035400 | 1 | ||
| Tree-based ortholog | many-to-1 | ST04G035400 | 1 | ||
| Thellungiella parvula | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP1G18060 | 1 | |
| Orthologous gene family | many-to-many | TP1G18060 TP5G31220 | 2 | ||
| Tree-based ortholog | many-to-many | TP1G18060 TP5G31220 | 2 | ||
| Theobroma cacao | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TC0008G05050 | 1 | |
| Orthologous gene family | many-to-1 | TC0008G05050 | 1 | ||
| Tree-based ortholog | many-to-1 | TC0008G05050 | 1 | ||
| Vitis vinifera | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV18G01040 | 1 | |
| Orthologous gene family | many-to-1 | VV18G01040 | 1 | ||
| Tree-based ortholog | many-to-1 | VV18G01040 | 1 | ||
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM06G06460 | 1 | |
| Orthologous gene family | many-to-1 | ZM06G06460 | 1 | ||
| Tree-based ortholog | many-to-1 | ZM06G06460 | 1 |