Integrative Orthology Viewer: PP00244G00310 (Physcomitrella patens)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Physcomitrella patens | Orthologous gene family | PP00244G00310 PP00244G00320 PP00244G00330 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | PP00244G00320 PP00244G00330 PP00244G00310 | 3 | ||
Tree-based ortholog | PP00244G00320 PP00244G00310 | 2 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-many | ATR_00045G00610 ATR_00057G00540 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ATR_00045G00610 | 1 | ||
Tree-based ortholog | many-to-1 | ATR_00045G00610 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-many | AL1G01700 AL3G18750 AL4G22380 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AL6G39690 | 1 | ||
Tree-based ortholog | many-to-many | AL3G18750 AL6G39690 AL1G01700 | 3 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT1G02500 AT2G36880 AT3G17390 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT4G01850 | 1 | ||
Tree-based ortholog | many-to-many | AT3G17390 AT4G01850 AT1G02500 | 3 | ||
Beta vulgaris | Orthologous gene family | many-to-many | BV4G08750 BV5G15810 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BV5G15810 | 1 | ||
Tree-based ortholog | many-to-many | BV5G15810 BV4G08750 | 2 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR00G04230 BR01G32010 BR03G18160 ... | 8 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BR01G32010 | 1 | ||
Tree-based ortholog | many-to-many | BR01G32010 BR03G35060 BR00G04230 ... | 5 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_001G01410 CRU_003G16330 CRU_004G18160 ... | 5 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRU_006G34160 | 1 | ||
Tree-based ortholog | many-to-many | CRU_003G16330 CRU_004G28700 CRU_006G34160 ... | 4 | ||
Carica papaya | Orthologous gene family | many-to-many | CP00067G00660 CP00102G00230 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00146G00370 | 1 | ||
Tree-based ortholog | many-to-many | CP00146G00370 CP00048G02080 CP00067G00660 | 3 | ||
Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR06G00310 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR06G00310 | 1 | ||
Tree-based ortholog | many-to-1 | CR06G00310 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-many | CL04G09190 CL09G04260 CL10G10010 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL10G10010 | 1 | ||
Tree-based ortholog | many-to-many | CL09G04260 CL10G10010 | 2 | ||
Citrus sinensis | Orthologous gene family | many-to-many | CS00001G05940 CS00061G00380 CS02078G00010 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS00001G05940 | 1 | ||
Tree-based ortholog | many-to-many | CS02078G00010 CS00001G05940 | 2 | ||
Cucumis melo | Orthologous gene family | many-to-many | CM00018G01340 CM00060G02560 CM00068G00140 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00018G01340 | 1 | ||
Tree-based ortholog | many-to-many | CM00060G02560 CM00018G01340 | 2 | ||
Eucalyptus grandis | Orthologous gene family | many-to-many | EG0001G08150 EG0008G33280 EG0010G03230 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | EG0008G33280 | 1 | ||
Tree-based ortholog | many-to-many | EG0008G33280 EG0001G08150 EG0011G05030 | 3 | ||
Fragaria vesca | Orthologous gene family | many-to-many | FV1G21780 FV4G19110 FV6G03830 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FV1G21780 | 1 | ||
Tree-based ortholog | many-to-many | FV6G07850 FV4G19110 FV6G07820 ... | 5 | ||
Glycine max | Orthologous gene family | many-to-many | GM00G00380 GM03G34120 GM03G38190 ... | 11 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | GM07G36150 GM17G04340 GM00G00380 ... | 4 | ||
Tree-based ortholog | many-to-many | GM10G28500 GM15G21890 GM00G00380 ... | 9 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR01G14680 GR04G14680 GR05G07130 ... | 8 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | GR08G13590 GR04G14680 GR07G11920 | 3 | ||
Tree-based ortholog | many-to-many | GR05G07130 GR08G13590 GR07G11920 ... | 5 | ||
Lotus japonicus | Orthologous gene family | many-to-many | LJ1G069230 LJ1G070060 LJ6G014790 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | LJ1G070060 | 1 | ||
Tree-based ortholog | many-to-many | LJ6G014790 LJ1G070060 LJ1G069230 | 3 | ||
Malus domestica | Orthologous gene family | many-to-many | MD00G123280 MD00G159640 MD00G393630 ... | 9 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | MD00G393630 MD13G012330 MD13G013590 | 3 | ||
Tree-based ortholog | many-to-many | MD13G013590 MD00G393630 MD13G012330 ... | 9 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME00080G00360 ME07571G00720 ME08316G00380 ... | 5 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ME00080G00360 | 1 | ||
Tree-based ortholog | many-to-many | ME00080G00360 ME07571G00720 ME10305G00660 | 3 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT1G063060 MT2G046710 MT4G123810 ... | 5 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MT7G110310 | 1 | ||
Tree-based ortholog | many-to-many | MT2G046710 MT4G123810 MT7G110310 | 3 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS01G18860 OS01G22010 OS05G04510 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS01G22010 | 1 | ||
Tree-based ortholog | many-to-many | OS05G04510 OS01G18860 OS01G22010 | 3 | ||
Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | many-to-many | OL14G00940 OL14G01600 | 2 | |
Tree-based ortholog | many-to-many | OL14G00940 OL14G01600 | 2 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT02G18900 PT02G18920 PT06G12320 ... | 6 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | PT14G11470 PT02G18920 PT02G18900 | 3 | ||
Tree-based ortholog | many-to-many | PT08G09930 PT10G15350 PT13G00410 ... | 6 | ||
Prunus persica | Orthologous gene family | many-to-many | PPE_001G10120 PPE_006G31180 PPE_007G15020 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPE_001G10120 | 1 | ||
Tree-based ortholog | many-to-many | PPE_001G10120 PPE_006G31180 PPE_010G00380 | 3 | ||
Ricinus communis | Orthologous gene family | many-to-many | RC29589G00200 RC29889G01450 RC30076G01390 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC30076G01390 | 1 | ||
Tree-based ortholog | many-to-many | RC30076G01390 RC29889G01450 RC30128G03580 | 3 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL01G101060 SL09G008280 SL10G083970 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL01G101060 | 1 | ||
Tree-based ortholog | many-to-many | SL12G099000 SL01G101060 | 2 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST01G038880 ST09G007810 ST10G025090 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST01G038880 | 1 | ||
Tree-based ortholog | many-to-many | ST12G030950 ST01G038880 | 2 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP3G15570 TP4G19160 TP4G29070 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP3G15570 | 1 | ||
Tree-based ortholog | many-to-many | TP3G15570 TP4G29070 TP6G01690 | 3 | ||
Theobroma cacao | Orthologous gene family | many-to-many | TC0001G32070 TC0004G31120 TC0005G06560 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TC0005G32550 | 1 | ||
Tree-based ortholog | many-to-many | TC0005G32550 TC0004G31120 TC0001G32070 | 3 | ||
Vitis vinifera | Orthologous gene family | many-to-1 | VV14G10200 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV08G10460 | 1 | ||
Tree-based ortholog | many-to-1 | VV14G10200 | 1 | ||
Zea mays | Orthologous gene family | many-to-many | ZM03G11460 ZM08G07530 ZM08G20490 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | ZM08G07530 ZM03G11460 | 2 | ||
Tree-based ortholog | many-to-many | ZM10G11700 ZM08G20490 ZM08G07530 ... | 4 |