Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
PP00234G00070
(Physcomitrella patens)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | PP00234G00070 PP00266G00060 | 2 |  |
| Orthologous gene family | PP00234G00070 PP00266G00060 | 2 | ||
| Tree-based ortholog | PP00266G00060 PP00234G00070 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ATR_00117G00080 | 1 | |
| Orthologous gene family | many-to-1 | ATR_00117G00080 | 1 | ||
| Tree-based ortholog | many-to-many | ATR_00093G00200 ATR_00117G00080 | 2 | ||
| Arabidopsis lyrata | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AL6G05220 | 1 | |
| Orthologous gene family | many-to-many | AL5G32420 AL6G05220 | 2 | ||
| Tree-based ortholog | many-to-many | AL5G32420 AL6G05220 | 2 | ||
| Arabidopsis thaliana | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT3G61650 | 1 | |
| Orthologous gene family | many-to-many | AT3G61650 AT5G05620 | 2 | ||
| Tree-based ortholog | many-to-many | AT5G05620 AT3G61650 | 2 | ||
| Beta vulgaris | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BV1G05570 | 1 | |
| Orthologous gene family | many-to-1 | BV1G05570 | 1 | ||
| Tree-based ortholog | many-to-1 | BV1G05570 | 1 | ||
| Brassica rapa | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BR09G40880 | 1 | |
| Orthologous gene family | many-to-1 | BR09G40880 | 1 | ||
| Tree-based ortholog | many-to-1 | BR09G40880 | 1 | ||
| Capsella rubella | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRU_006G04410 | 1 | |
| Orthologous gene family | many-to-many | CRU_005G26920 CRU_006G04410 | 2 | ||
| Tree-based ortholog | many-to-many | CRU_006G04410 CRU_005G26920 | 2 | ||
| Carica papaya | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00194G00080 | 1 | |
| Orthologous gene family | many-to-1 | CP00194G00080 | 1 | ||
| Tree-based ortholog | many-to-1 | CP00194G00080 | 1 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR06G13080 | 1 | |
| Tree-based ortholog | many-to-1 | CR06G13080 | 1 | ||
| Citrullus lanatus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL05G01360 | 1 | |
| Orthologous gene family | many-to-1 | CL05G01360 | 1 | ||
| Tree-based ortholog | many-to-1 | CL05G01360 | 1 | ||
| Citrus sinensis | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS00001G04010 | 1 | |
| Orthologous gene family | many-to-1 | CS00001G04010 | 1 | ||
| Tree-based ortholog | many-to-1 | CS00001G04010 | 1 | ||
| Cucumis melo | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00006G01430 | 1 | |
| Orthologous gene family | many-to-1 | CM00006G01430 | 1 | ||
| Tree-based ortholog | many-to-1 | CM00006G01430 | 1 | ||
| Eucalyptus grandis | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | EG0005G00700 | 1 | |
| Orthologous gene family | many-to-1 | EG0005G00700 | 1 | ||
| Tree-based ortholog | many-to-1 | EG0005G00700 | 1 | ||
| Fragaria vesca | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FV7G06310 | 1 | |
| Orthologous gene family | many-to-1 | FV7G06310 | 1 | ||
| Tree-based ortholog | many-to-1 | FV7G06310 | 1 | ||
| Glycine max | Best-Hits-and-Inparalogs(BHI)family | many-to-many | GM03G41670 GM19G44260 | 2 | |
| Orthologous gene family | many-to-many | GM03G41670 GM19G44260 | 2 | ||
| Tree-based ortholog | many-to-many | GM03G41670 GM19G44260 | 2 | ||
| Gossypium raimondii | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GR08G12360 | 1 | |
| Orthologous gene family | many-to-many | GR07G10600 GR08G12360 | 2 | ||
| Tree-based ortholog | many-to-many | GR07G10600 GR08G12360 | 2 | ||
| Lotus japonicus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | LJ2G046720 | 1 | |
| Orthologous gene family | many-to-1 | LJ2G046720 | 1 | ||
| Tree-based ortholog | many-to-1 | LJ2G046720 | 1 | ||
| Malus domestica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MD00G386360 | 1 | |
| Orthologous gene family | many-to-1 | MD00G386360 | 1 | ||
| Tree-based ortholog | many-to-many | MD00G386320 MD01G006310 MD00G386360 | 3 | ||
| Manihot esculenta | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ME02658G00530 | 1 | |
| Orthologous gene family | many-to-many | ME02658G00530 ME03581G01010 | 2 | ||
| Tree-based ortholog | many-to-many | ME03581G01010 ME02658G00530 | 2 | ||
| Medicago truncatula | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MT7G117050 | 1 | |
| Orthologous gene family | many-to-1 | MT7G117050 | 1 | ||
| Tree-based ortholog | many-to-1 | MT7G117050 | 1 | ||
| Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS05G06450 | 1 | |
| Orthologous gene family | many-to-1 | OS05G06450 | 1 | ||
| Tree-based ortholog | many-to-1 | OS05G06450 | 1 | ||
| Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | many-to-many | OL02G02110 OL02G02120 | 2 | |
| Tree-based ortholog | many-to-many | OL02G02120 OL02G02110 | 2 | ||
| Populus trichocarpa | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PT14G09490 PT02G16780 | 2 | |
| Orthologous gene family | many-to-many | PT02G16780 PT14G09490 | 2 | ||
| Tree-based ortholog | many-to-many | PT02G16780 PT14G09490 | 2 | ||
| Prunus persica | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PPE_001G55600 PPE_002G10200 | 2 | |
| Orthologous gene family | many-to-many | PPE_001G55600 PPE_002G10200 PPE_008G05990 | 3 | ||
| Tree-based ortholog | many-to-many | PPE_001G55600 PPE_008G05990 PPE_002G10200 | 3 | ||
| Ricinus communis | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC28049G00120 | 1 | |
| Orthologous gene family | many-to-1 | RC28049G00120 | 1 | ||
| Tree-based ortholog | many-to-1 | RC28049G00120 | 1 | ||
| Solanum lycopersicum | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL03G111380 | 1 | |
| Orthologous gene family | many-to-1 | SL03G111380 | 1 | ||
| Tree-based ortholog | many-to-1 | SL03G111380 | 1 | ||
| Solanum tuberosum | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST03G023700 | 1 | |
| Orthologous gene family | many-to-1 | ST03G023700 | 1 | ||
| Tree-based ortholog | many-to-1 | ST03G023700 | 1 | ||
| Thellungiella parvula | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP5G01760 | 1 | |
| Orthologous gene family | many-to-1 | TP5G01760 | 1 | ||
| Tree-based ortholog | many-to-1 | TP5G01760 | 1 | ||
| Theobroma cacao | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TC0001G34460 | 1 | |
| Orthologous gene family | many-to-1 | TC0001G34460 | 1 | ||
| Tree-based ortholog | many-to-1 | TC0001G34460 | 1 | ||
| Vitis vinifera | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV15G05950 | 1 | |
| Orthologous gene family | many-to-1 | VV15G05950 | 1 | ||
| Tree-based ortholog | many-to-1 | VV15G05950 | 1 | ||
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | many-to-many | ZM08G12110 ZM06G19400 | 2 | |
| Orthologous gene family | many-to-many | ZM06G19400 ZM08G12110 | 2 | ||
| Tree-based ortholog | many-to-many | ZM05G07150 ZM06G04410 ZM06G19400 ... | 4 |