Integrative Orthology Viewer: PP00078G00190 (Physcomitrella patens)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Physcomitrella patens | Orthologous gene family | PP00078G00190 PP00271G00420 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | PP00271G00420 PP00078G00190 | 2 | ||
Tree-based ortholog | PP00078G00190 PP00271G00420 | 2 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-many | ATR_00063G00750 ATR_00135G00110 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ATR_00063G00750 | 1 | ||
Tree-based ortholog | many-to-many | ATR_00135G00110 ATR_00063G00750 | 2 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-many | AL6G12020 AL6G19650 AL7G17560 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AL6G19650 | 1 | ||
Tree-based ortholog | many-to-many | AL7G17560 AL6G12020 AL6G19650 | 3 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT4G24580 AT5G12150 AT5G19390 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT5G19390 | 1 | ||
Tree-based ortholog | many-to-many | AT4G24580 AT5G12150 AT5G19390 | 3 | ||
Beta vulgaris | Orthologous gene family | many-to-1 | BV4G13880 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BV4G13880 | 1 | ||
Tree-based ortholog | many-to-many | BV4G13880 BV1G09830 | 2 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR01G14600 BR02G09510 BR03G48000 ... | 5 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BR02G09510 | 1 | ||
Tree-based ortholog | many-to-many | BR01G14600 BR08G17910 BR03G48000 ... | 6 | ||
Capsella rubella | Orthologous gene family | many-to-1 | CRU_007G15610 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRU_006G17280 | 1 | ||
Tree-based ortholog | many-to-many | CRU_007G15610 CRU_006G10380 CRU_006G17280 | 3 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP00021G00010 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00157G00580 | 1 | ||
Tree-based ortholog | many-to-many | CP00157G00580 CP00021G00010 | 2 | ||
Citrullus lanatus | Orthologous gene family | many-to-many | CL03G11600 CL08G11560 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL03G11600 | 1 | ||
Tree-based ortholog | many-to-many | CL03G11600 CL08G11560 | 2 | ||
Citrus sinensis | Orthologous gene family | many-to-many | CS00004G02830 CS00120G00230 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS00120G00230 | 1 | ||
Tree-based ortholog | many-to-many | CS00120G00230 CS00004G02830 | 2 | ||
Cucumis melo | Orthologous gene family | many-to-1 | CM00024G01470 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00024G01470 | 1 | ||
Tree-based ortholog | many-to-1 | CM00024G01470 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0002G31270 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | EG0002G31270 | 1 | ||
Tree-based ortholog | many-to-many | EG0002G31270 EG0006G17340 | 2 | ||
Fragaria vesca | Orthologous gene family | many-to-many | FV2G47810 FV5G20930 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FV5G20930 | 1 | ||
Tree-based ortholog | many-to-many | FV2G47810 FV5G20930 | 2 | ||
Glycine max | Orthologous gene family | many-to-many | GM02G44780 GM14G03960 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | GM02G44780 GM14G03960 | 2 | ||
Tree-based ortholog | many-to-many | GM14G03960 GM02G44780 GM01G24720 ... | 5 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR05G09600 GR09G07720 GR13G25350 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GR13G25350 | 1 | ||
Tree-based ortholog | many-to-many | GR13G25350 GR09G07720 GR02G14240 ... | 5 | ||
Lotus japonicus | Orthologous gene family | many-to-1 | LJ2G046120 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | LJ2G046120 | 1 | ||
Tree-based ortholog | many-to-1 | LJ2G046120 | 1 | ||
Malus domestica | Orthologous gene family | many-to-many | MD00G009320 MD08G004870 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MD08G004870 | 1 | ||
Tree-based ortholog | many-to-many | MD08G004870 MD00G009320 MD00G319120 ... | 5 | ||
Manihot esculenta | Orthologous gene family | many-to-1 | ME06916G01930 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ME06916G01270 | 1 | ||
Tree-based ortholog | many-to-many | ME06916G01270 ME06916G01280 ME06916G01930 ... | 4 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT3G100580 MT5G065960 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MT5G089490 | 1 | ||
Tree-based ortholog | many-to-many | MT5G089490 MT3G100580 MT5G065960 | 3 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS03G11140 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS07G46450 | 1 | ||
Tree-based ortholog | many-to-many | OS03G11140 OS03G15180 OS07G46450 ... | 4 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT02G10430 PT05G15740 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | PT09G06970 PT01G27520 | 2 | ||
Tree-based ortholog | many-to-many | PT09G06970 PT01G27520 PT02G10430 ... | 4 | ||
Prunus persica | Orthologous gene family | many-to-many | PPE_004G29190 PPE_004G29210 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPE_004G29190 | 1 | ||
Tree-based ortholog | many-to-many | PPE_004G29190 PPE_004G29210 PPE_001G58630 | 3 | ||
Ricinus communis | Orthologous gene family | many-to-many | RC29908G02820 RC30142G00060 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC30142G00060 | 1 | ||
Tree-based ortholog | many-to-many | RC30142G00060 RC29908G02820 | 2 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL01G008770 SL04G076140 SL11G064880 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL01G008770 | 1 | ||
Tree-based ortholog | many-to-many | SL11G064860 SL01G008770 SL11G064880 ... | 5 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST01G009460 ST04G029500 ST11G020720 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST01G009460 | 1 | ||
Tree-based ortholog | many-to-many | ST01G009460 ST11G020720 ST04G029500 ... | 4 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP6G25020 TP7G22580 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP6G25020 | 1 | ||
Tree-based ortholog | many-to-many | TP7G22580 TP6G31480 TP6G25020 | 3 | ||
Theobroma cacao | Orthologous gene family | many-to-1 | TC0009G24440 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TC0009G24440 | 1 | ||
Tree-based ortholog | many-to-many | TC0009G24440 TC0008G06670 | 2 | ||
Vitis vinifera | Orthologous gene family | many-to-many | VV00G06730 VV06G10970 VV18G04400 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV06G10970 | 1 | ||
Tree-based ortholog | many-to-many | VV06G10970 VV18G04400 VV00G18340 ... | 4 | ||
Zea mays | Orthologous gene family | many-to-many | ZM00G00230 ZM01G15850 ZM02G40250 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM01G15850 | 1 | ||
Tree-based ortholog | many-to-many | ZM09G06810 ZM06G06670 ZM09G24460 ... | 9 |