Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
PP00060G00170
(Physcomitrella patens)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Physcomitrella patens | Orthologous gene family | PP00060G00170 | 1 |  |
| Best-Hits-and-Inparalogs(BHI)family | PP00060G00170 | 1 | ||
| Tree-based ortholog | PP00060G00170 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | 1-to-1 | ATR_00056G01030 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00056G01030 | 1 | ||
| Tree-based ortholog | 1-to-1 | ATR_00056G01030 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | 1-to-1 | AL7G12620 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL7G12620 | 1 | ||
| Tree-based ortholog | 1-to-many | AL7G12620 AL2G19910 | 2 | ||
| Arabidopsis thaliana | Orthologous gene family | 1-to-1 | AT4G29120 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT4G29120 | 1 | ||
| Tree-based ortholog | 1-to-many | AT4G29120 AT1G71170 AT1G71180 | 3 | ||
| Beta vulgaris | Orthologous gene family | 1-to-1 | BV8G05590 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV8G05590 | 1 | ||
| Tree-based ortholog | 1-to-many | BV8G05590 BV4G15870 | 2 | ||
| Brassica rapa | Orthologous gene family | 1-to-1 | BR06G04550 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR06G04550 | 1 | ||
| Tree-based ortholog | 1-to-many | BR06G04550 BR02G20890 | 2 | ||
| Capsella rubella | Orthologous gene family | 1-to-1 | CRU_007G10820 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_007G10820 | 1 | ||
| Tree-based ortholog | 1-to-many | CRU_007G10820 CRU_002G17020 | 2 | ||
| Carica papaya | Orthologous gene family | 1-to-1 | CP00078G00190 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00078G00190 | 1 | ||
| Tree-based ortholog | 1-to-many | CP00078G00190 CP00032G00460 CP00113G00520 | 3 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR11G00940 | 1 | |
| Citrullus lanatus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL05G10960 | 1 | |
| Tree-based ortholog | 1-to-1 | CL05G10960 | 1 | ||
| Citrus sinensis | Orthologous gene family | 1-to-1 | CS00027G00620 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00027G00620 | 1 | ||
| Tree-based ortholog | 1-to-many | CS00027G00620 CS00141G00050 CS02673G00030 | 3 | ||
| Cucumis melo | Orthologous gene family | 1-to-1 | CM00003G07240 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00003G07240 | 1 | ||
| Tree-based ortholog | 1-to-many | CM00003G07240 CM00038G01110 | 2 | ||
| Eucalyptus grandis | Orthologous gene family | 1-to-many | EG0003G08140 EG0003G08180 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | EG0003G08180 EG0003G08140 | 2 | ||
| Tree-based ortholog | 1-to-many | EG0003G08160 EG0003G08180 EG2994G00010 ... | 5 | ||
| Fragaria vesca | Orthologous gene family | 1-to-1 | FV0G35650 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV0G35650 | 1 | ||
| Tree-based ortholog | 1-to-many | FV0G35650 FV0G35690 FV1G11680 ... | 4 | ||
| Glycine max | Orthologous gene family | 1-to-many | GM05G35880 GM08G03740 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM05G35880 GM08G03740 | 2 | ||
| Tree-based ortholog | 1-to-many | GM08G03740 GM05G35880 GM05G30310 | 3 | ||
| Gossypium raimondii | Orthologous gene family | 1-to-1 | GR10G07730 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR10G07730 | 1 | ||
| Tree-based ortholog | 1-to-many | GR10G07730 GR13G03790 | 2 | ||
| Lotus japonicus | Orthologous gene family | 1-to-1 | LJ4G048470 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ4G048470 | 1 | ||
| Tree-based ortholog | 1-to-1 | LJ4G048470 | 1 | ||
| Malus domestica | Orthologous gene family | 1-to-many | MD00G007160 MD02G005720 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD00G007160 MD02G005720 | 2 | ||
| Tree-based ortholog | 1-to-many | MD00G007160 MD02G005720 MD02G005730 ... | 8 | ||
| Manihot esculenta | Orthologous gene family | 1-to-1 | ME09501G00410 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME09501G00410 | 1 | ||
| Tree-based ortholog | 1-to-many | ME09501G00410 ME00847G00440 ME05979G00520 | 3 | ||
| Medicago truncatula | Orthologous gene family | 1-to-1 | MT8G102470 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT8G102470 | 1 | ||
| Tree-based ortholog | 1-to-many | MT8G102470 MT8G088900 | 2 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | 1-to-1 | OS01G53910 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS01G53910 | 1 | ||
| Tree-based ortholog | 1-to-many | OS01G53910 OS05G49070 | 2 | ||
| Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL05G00200 | 1 | |
| Populus trichocarpa | Orthologous gene family | 1-to-1 | PT18G08800 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT18G08800 | 1 | ||
| Tree-based ortholog | 1-to-many | PT18G08800 PT01G21150 | 2 | ||
| Prunus persica | Orthologous gene family | 1-to-1 | PPE_007G23890 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_007G23890 | 1 | ||
| Tree-based ortholog | 1-to-many | PPE_007G23890 PPE_001G54530 PPE_001G54540 | 3 | ||
| Ricinus communis | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30071G00200 | 1 | |
| Tree-based ortholog | 1-to-many | RC29912G01600 RC30071G00200 | 2 | ||
| Solanum lycopersicum | Orthologous gene family | 1-to-1 | SL01G099240 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL01G099240 | 1 | ||
| Tree-based ortholog | 1-to-many | SL01G099240 SL01G081510 | 2 | ||
| Solanum tuberosum | Orthologous gene family | 1-to-1 | ST01G037050 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST01G037050 | 1 | ||
| Tree-based ortholog | 1-to-many | ST01G037050 ST01G027590 | 2 | ||
| Thellungiella parvula | Orthologous gene family | 1-to-1 | TP1G34890 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP1G34890 | 1 | ||
| Tree-based ortholog | 1-to-many | TP1G34890 TP5G26340 | 2 | ||
| Theobroma cacao | Orthologous gene family | 1-to-1 | TC0009G09620 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0009G09620 | 1 | ||
| Tree-based ortholog | 1-to-many | TC0009G09620 TC0002G08340 TC0002G08330 | 3 | ||
| Vitis vinifera | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV12G04850 | 1 | |
| Tree-based ortholog | 1-to-1 | VV12G04850 | 1 | ||
| Zea mays | Orthologous gene family | 1-to-1 | ZM03G32250 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM03G32250 | 1 | ||
| Tree-based ortholog | 1-to-many | ZM03G32250 ZM08G16220 ZM08G10660 | 3 |