Integrative Orthology Viewer: PP00054G01770 (Physcomitrella patens)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Physcomitrella patens | Orthologous gene family | PP00001G01460 PP00015G00830 PP00021G02000 ... | 8 | |
Best-Hits-and-Inparalogs(BHI)family | PP00176G00570 PP00054G01770 PP00015G00830 | 3 | ||
Tree-based ortholog | PP00115G00380 PP00115G00370 PP00015G00830 ... | 4 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00032G00330 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ATR_00032G00330 | 1 | ||
Tree-based ortholog | many-to-1 | ATR_00009G01210 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-many | AL1G03640 AL3G04230 AL4G27880 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AL2G13320 | 1 | ||
Tree-based ortholog | many-to-many | AL3G04230 AL1G03640 | 2 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT1G04310 AT2G40940 AT3G23150 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT1G66340 | 1 | ||
Tree-based ortholog | many-to-many | AT3G04580 AT1G04310 AT3G23150 | 3 | ||
Beta vulgaris | Orthologous gene family | many-to-many | BV0G19580 BV3G06950 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BV7G12240 | 1 | ||
Tree-based ortholog | many-to-many | BV3G06950 BV0G42220 BV0G19580 | 3 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR01G28110 BR05G00410 BR08G31410 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BR07G24000 | 1 | ||
Tree-based ortholog | many-to-many | BR01G40810 BR10G03470 BR01G28110 | 3 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_001G03220 CRU_003G22390 CRU_004G22470 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRU_002G11570 | 1 | ||
Tree-based ortholog | many-to-many | CRU_003G03570 CRU_001G03220 CRU_003G22390 | 3 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP00151G00350 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00084G00510 | 1 | ||
Tree-based ortholog | many-to-many | CP02388G00020 CP00044G00930 | 2 | ||
Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | many-to-many | CR13G02200 CR02G01610 | 2 | |
Citrullus lanatus | Orthologous gene family | many-to-1 | CL05G04940 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL11G05300 | 1 | ||
Tree-based ortholog | many-to-1 | CL05G04940 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-many | CS00001G07140 CS00566G00070 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS00206G00110 | 1 | ||
Tree-based ortholog | many-to-many | CS00222G00130 CS00566G00070 | 2 | ||
Cucumis melo | Orthologous gene family | many-to-many | CM00006G05530 CM00026G02850 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00003G00040 | 1 | ||
Tree-based ortholog | many-to-1 | CM00006G05530 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-many | EG0008G25500 EG0010G18060 EG0011G29780 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | EG0010G18060 | 1 | ||
Tree-based ortholog | many-to-many | EG0008G25500 EG0008G34540 | 2 | ||
Fragaria vesca | Orthologous gene family | many-to-many | FV1G24610 FV2G28480 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FV1G19490 | 1 | ||
Tree-based ortholog | many-to-many | FV1G24610 FV0G26030 FV1G19460 | 3 | ||
Glycine max | Orthologous gene family | many-to-many | GM03G37470 GM10G33240 GM19G40090 ... | 5 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | GM12G37050 GM09G00490 | 2 | ||
Tree-based ortholog | many-to-many | GM19G43840 GM03G41220 GM10G31040 ... | 10 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR05G04790 GR06G24780 GR07G12630 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | GR09G35820 GR02G03830 | 2 | ||
Tree-based ortholog | many-to-many | GR05G04790 GR06G24780 GR07G28010 | 3 | ||
Lotus japonicus | Orthologous gene family | many-to-many | LJ1G071050 LJ5G023790 LJ6G000550 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | LJ3G005870 | 1 | ||
Tree-based ortholog | many-to-many | LJ5G023800 LJ1G073520 LJ6G000550 ... | 4 | ||
Malus domestica | Orthologous gene family | many-to-many | MD00G009920 MD00G272930 MD00G332460 ... | 9 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | MD15G008440 MD15G020440 | 2 | ||
Tree-based ortholog | many-to-many | MD07G010770 MD05G019250 MD00G272930 ... | 9 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME01551G01270 ME03802G00390 ME04457G00400 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ME00271G00050 | 1 | ||
Tree-based ortholog | many-to-many | ME10563G00900 ME01551G01270 ME03802G00390 ... | 4 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT1G044210 MT1G073840 MT7G109150 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MT4G031150 | 1 | ||
Tree-based ortholog | many-to-many | MT7G116330 MT1G079790 MT1G073840 ... | 4 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS02G57530 OS03G49500 OS05G06320 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS03G49500 | 1 | ||
Tree-based ortholog | many-to-many | OS02G57530 OS07G15540 OS04G08740 ... | 5 | ||
Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL09G02040 | 1 | |
Populus trichocarpa | Orthologous gene family | many-to-many | PT02G20150 PT08G16440 PT10G07430 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | PT03G03230 PT01G20420 | 2 | ||
Tree-based ortholog | many-to-many | PT08G16440 PT10G07430 PT00G05870 ... | 5 | ||
Prunus persica | Orthologous gene family | many-to-many | PPE_001G03310 PPE_008G27730 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPE_001G55910 | 1 | ||
Tree-based ortholog | many-to-many | PPE_001G03310 PPE_006G35170 | 2 | ||
Ricinus communis | Orthologous gene family | many-to-many | RC29603G00260 RC29680G00140 RC29986G00760 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC28802G00070 | 1 | ||
Tree-based ortholog | many-to-many | RC29603G00260 RC29680G00140 RC44413G00010 ... | 11 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL06G053710 SL09G075440 SL09G089610 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL12G011330 | 1 | ||
Tree-based ortholog | many-to-1 | SL09G075440 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST06G017120 ST09G022980 ST09G026410 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST12G006350 | 1 | ||
Tree-based ortholog | many-to-1 | ST09G022980 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP3G20800 TP4G29460 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP4G29460 | 1 | ||
Tree-based ortholog | many-to-many | TP3G03420 TP1G03130 TP1G03120 ... | 4 | ||
Theobroma cacao | Orthologous gene family | many-to-many | TC0001G30440 TC0004G25190 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TC0007G13760 | 1 | ||
Tree-based ortholog | many-to-many | TC0004G25190 TC0005G27520 | 2 | ||
Vitis vinifera | Orthologous gene family | many-to-many | VV05G07600 VV07G08720 VV14G14790 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV07G08720 | 1 | ||
Tree-based ortholog | many-to-many | VV06G03070 VV14G14790 VV05G07600 | 3 | ||
Zea mays | Orthologous gene family | many-to-many | ZM01G49860 ZM02G20520 ZM04G24880 ... | 7 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | ZM05G05940 ZM01G49860 | 2 | ||
Tree-based ortholog | many-to-many | ZM04G24880 ZM07G23490 ZM04G37540 ... | 6 |