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Integrative Orthology Viewer:
PP00054G01330
(Physcomitrella patens)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Physcomitrella patens | Orthologous gene family | PP00054G01330 PP00103G00360 PP00249G00400 ... | 4 |  |
| Best-Hits-and-Inparalogs(BHI)family | PP00103G00360 PP00263G00160 PP00054G01330 ... | 4 | ||
| Tree-based ortholog | PP00263G00160 PP00103G00360 PP00054G01330 | 3 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ATR_00209G00070 | 1 | |
| Tree-based ortholog | many-to-many | ATR_00019G01470 ATR_00019G01480 ATR_00209G00070 | 3 | ||
| Arabidopsis lyrata | Best-Hits-and-Inparalogs(BHI)family | many-to-many | AL8G04490 AL8G04450 | 2 | |
| Tree-based ortholog | many-to-many | AL8G04490 AL8G04450 AL7G22490 | 3 | ||
| Arabidopsis thaliana | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT4G19950 | 1 | |
| Tree-based ortholog | many-to-many | AT5G44860 AT4G19950 AT1G31130 | 3 | ||
| Beta vulgaris | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BV0G73850 | 1 | |
| Tree-based ortholog | many-to-many | BV0G73850 BV6G07350 | 2 | ||
| Brassica rapa | Orthologous gene family | many-to-many | BR07G05560 BR08G09680 BR09G27580 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BR09G27580 | 1 | ||
| Tree-based ortholog | many-to-many | BR06G37740 BR09G27580 BR07G05560 ... | 4 | ||
| Capsella rubella | Orthologous gene family | many-to-1 | CRU_001G28160 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRU_001G28160 | 1 | ||
| Tree-based ortholog | many-to-many | CRU_008G03270 CRU_007G20250 CRU_001G28160 | 3 | ||
| Carica papaya | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00030G01240 | 1 | |
| Tree-based ortholog | many-to-many | CP00030G01240 CP00042G01580 | 2 | ||
| Citrullus lanatus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL11G11060 | 1 | |
| Tree-based ortholog | many-to-many | CL03G04170 CL11G11060 CL08G04670 ... | 7 | ||
| Citrus sinensis | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS00008G02010 | 1 | |
| Tree-based ortholog | many-to-many | CS00008G02010 CS00178G00140 CS00178G00150 ... | 5 | ||
| Cucumis melo | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00081G00060 | 1 | |
| Tree-based ortholog | many-to-many | CM00001G05130 CM00081G00060 CM01598G00110 ... | 6 | ||
| Eucalyptus grandis | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | EG0008G40330 | 1 | |
| Tree-based ortholog | many-to-many | EG0010G27000 EG0006G34290 EG0008G40330 | 3 | ||
| Fragaria vesca | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FV3G10940 | 1 | |
| Tree-based ortholog | many-to-many | FV3G10940 FV2G23320 | 2 | ||
| Glycine max | Best-Hits-and-Inparalogs(BHI)family | many-to-many | GM13G09240 GM14G26700 | 2 | |
| Tree-based ortholog | many-to-many | GM05G26160 GM13G09240 GM14G26700 ... | 6 | ||
| Gossypium raimondii | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GR12G03540 | 1 | |
| Tree-based ortholog | many-to-many | GR08G04870 GR05G26760 GR12G03540 ... | 7 | ||
| Lotus japonicus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | LJ4G003700 | 1 | |
| Tree-based ortholog | many-to-1 | LJ4G003700 | 1 | ||
| Malus domestica | Best-Hits-and-Inparalogs(BHI)family | many-to-many | MD05G009000 MD10G019230 | 2 | |
| Tree-based ortholog | many-to-many | MD05G009000 MD10G019230 MD00G342660 ... | 5 | ||
| Manihot esculenta | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ME03699G00060 | 1 | |
| Tree-based ortholog | many-to-many | ME04134G00060 ME04758G00010 ME06948G00700 ... | 5 | ||
| Medicago truncatula | Orthologous gene family | many-to-1 | MT1G029440 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | MT3G088975 MT1G029440 | 2 | ||
| Tree-based ortholog | many-to-many | MT3G014430 MT7G021620 MT4G096890 ... | 6 | ||
| Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS08G01590 | 1 | |
| Tree-based ortholog | many-to-many | OS01G58620 OS08G01590 | 2 | ||
| Populus trichocarpa | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PT07G10560 PT07G10570 | 2 | |
| Tree-based ortholog | many-to-many | PT15G12560 PT12G12580 PT07G10560 ... | 9 | ||
| Prunus persica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPE_008G01480 | 1 | |
| Tree-based ortholog | many-to-many | PPE_004G09950 PPE_008G01480 | 2 | ||
| Ricinus communis | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC30137G00120 | 1 | |
| Tree-based ortholog | many-to-many | RC29840G00200 RC30137G00120 RC29648G00090 ... | 4 | ||
| Solanum lycopersicum | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL04G064530 | 1 | |
| Tree-based ortholog | many-to-many | SL01G080910 SL02G031830 SL04G064530 | 3 | ||
| Solanum tuberosum | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST04G024680 | 1 | |
| Tree-based ortholog | many-to-many | ST01G028280 ST02G006100 ST04G024680 | 3 | ||
| Thellungiella parvula | Orthologous gene family | many-to-1 | TP1G26960 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP1G26960 | 1 | ||
| Tree-based ortholog | many-to-many | TP2G09690 TP7G18390 TP1G26960 | 3 | ||
| Theobroma cacao | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TC0002G00740 | 1 | |
| Tree-based ortholog | many-to-many | TC0002G00740 TC0001G12850 TC0008G13570 | 3 | ||
| Vitis vinifera | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV18G11380 | 1 | |
| Tree-based ortholog | many-to-many | VV01G09470 VV18G11380 VV18G11320 | 3 | ||
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | many-to-many | ZM06G00190 ZM01G39620 | 2 | |
| Tree-based ortholog | many-to-many | ZM08G33480 ZM03G29430 ZM01G39620 ... | 5 |