Integrative Orthology Viewer: PP00053G01120 (Physcomitrella patens)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Physcomitrella patens | Orthologous gene family | PP00053G01120 PP00276G00500 | 2 | |
Anchor point | PP00276G00500 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | PP00053G01120 PP00276G00500 | 2 | ||
Tree-based ortholog | PP00276G00500 PP00053G01120 | 2 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00025G01160 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ATR_00025G01160 | 1 | ||
Tree-based ortholog | many-to-1 | ATR_00025G01160 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-1 | AL6G27860 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AL6G27860 | 1 | ||
Tree-based ortholog | many-to-many | AL6G27860 AL5G10650 | 2 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT5G27400 AT5G27410 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | AT5G27400 AT5G27410 | 2 | ||
Tree-based ortholog | many-to-1 | AT5G27400 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-1 | BV0G07680 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BV0G07680 | 1 | ||
Tree-based ortholog | many-to-1 | BV0G07680 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-1 | BR06G27780 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BR06G27780 | 1 | ||
Tree-based ortholog | many-to-many | BR06G27780 BR00G10380 | 2 | ||
Capsella rubella | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRU_006G24360 | 1 | |
Tree-based ortholog | many-to-many | CRU_006G24360 CRU_003G04280 | 2 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP00048G00130 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00048G00130 | 1 | ||
Tree-based ortholog | many-to-1 | CP00048G00130 | 1 | ||
Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR17G11480 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR17G11480 | 1 | ||
Tree-based ortholog | many-to-1 | CR10G08760 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-1 | CL02G16290 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL02G16290 | 1 | ||
Tree-based ortholog | many-to-1 | CL02G16290 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-1 | CS00407G00030 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS00407G00030 | 1 | ||
Tree-based ortholog | many-to-1 | CS00407G00030 | 1 | ||
Cucumis melo | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00007G09690 | 1 | |
Tree-based ortholog | many-to-1 | CM00003G04200 | 1 | ||
Eucalyptus grandis | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | EG0010G05920 | 1 | |
Tree-based ortholog | many-to-1 | EG0002G15860 | 1 | ||
Fragaria vesca | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FV6G06370 | 1 | |
Tree-based ortholog | many-to-1 | FV6G06370 | 1 | ||
Glycine max | Orthologous gene family | many-to-1 | GM19G42540 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GM19G42540 | 1 | ||
Tree-based ortholog | many-to-many | GM03G40010 GM19G42540 | 2 | ||
Gossypium raimondii | Orthologous gene family | many-to-1 | GR04G24350 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GR04G24350 | 1 | ||
Tree-based ortholog | many-to-1 | GR04G24350 | 1 | ||
Lotus japonicus | Orthologous gene family | many-to-many | LJ1G072440 LJ1G072480 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | LJ1G072440 | 1 | ||
Tree-based ortholog | many-to-1 | LJ1G072480 | 1 | ||
Malus domestica | Orthologous gene family | many-to-many | MD00G029620 MD04G017110 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | MD00G029620 MD04G017110 | 2 | ||
Tree-based ortholog | many-to-many | MD00G029620 MD00G112760 MD00G247840 | 3 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME03614G04430 ME03614G04440 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ME03614G04430 | 1 | ||
Tree-based ortholog | many-to-many | ME03614G04430 ME03614G04440 | 2 | ||
Medicago truncatula | Orthologous gene family | many-to-1 | MT7G113850 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MT7G113850 | 1 | ||
Tree-based ortholog | many-to-1 | MT7G113850 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS05G05130 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS05G05130 | 1 | ||
Tree-based ortholog | many-to-1 | OS05G05130 | 1 | ||
Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL01G01130 | 1 | |
Populus trichocarpa | Orthologous gene family | many-to-1 | PT05G03900 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PT05G03900 | 1 | ||
Tree-based ortholog | many-to-1 | PT05G03900 | 1 | ||
Prunus persica | Orthologous gene family | many-to-1 | PPE_006G33450 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPE_006G33450 | 1 | ||
Tree-based ortholog | many-to-1 | PPE_006G33450 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-1 | RC30128G01280 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC30128G01280 | 1 | ||
Tree-based ortholog | many-to-many | RC30128G01280 RC50557G00010 | 2 | ||
Solanum lycopersicum | Orthologous gene family | many-to-1 | SL10G009400 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL10G009400 | 1 | ||
Tree-based ortholog | many-to-1 | SL10G009400 | 1 | ||
Solanum tuberosum | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST02G009890 | 1 | |
Tree-based ortholog | many-to-1 | ST01G036390 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-1 | TP2G20630 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP2G20630 | 1 | ||
Tree-based ortholog | many-to-1 | TP2G20630 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-1 | TC0005G30560 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TC0005G30560 | 1 | ||
Tree-based ortholog | many-to-1 | TC0005G30560 | 1 | ||
Vitis vinifera | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV14G00090 | 1 | |
Tree-based ortholog | many-to-1 | VV14G00090 | 1 | ||
Zea mays | Orthologous gene family | many-to-1 | ZM10G12110 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM10G12110 | 1 | ||
Tree-based ortholog | many-to-1 | ZM10G12110 | 1 |