Integrative Orthology Viewer: PP00048G00320 (Physcomitrella patens)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Physcomitrella patens | Orthologous gene family | PP00048G00320 PP00068G00230 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | PP00048G00320 PP00068G00230 | 2 | ||
Tree-based ortholog | PP00048G00320 PP00068G00230 | 2 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00057G02470 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ATR_00057G02470 | 1 | ||
Tree-based ortholog | many-to-many | ATR_00057G02470 ATR_00050G00400 | 2 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-many | AL3G05300 AL6G27640 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AL3G05300 | 1 | ||
Tree-based ortholog | many-to-many | AL6G27640 AL3G05300 AL6G03740 | 3 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT3G05420 AT5G27630 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT3G05420 | 1 | ||
Tree-based ortholog | many-to-many | AT5G27630 AT3G05420 AT5G04420 | 3 | ||
Beta vulgaris | Orthologous gene family | many-to-1 | BV4G03850 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BV4G03850 | 1 | ||
Tree-based ortholog | many-to-many | BV4G03850 BV0G61430 | 2 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR00G04220 BR02G36010 BR03G29930 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BR05G34930 | 1 | ||
Tree-based ortholog | many-to-many | BR02G36010 BR03G29930 BR00G04220 ... | 5 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_003G04520 CRU_006G24200 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRU_003G04520 | 1 | ||
Tree-based ortholog | many-to-many | CRU_006G24200 CRU_003G04520 CRU_006G03250 | 3 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP00048G00760 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00048G00760 | 1 | ||
Tree-based ortholog | many-to-many | CP00048G00760 CP00706G00060 | 2 | ||
Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR02G00370 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR02G00370 | 1 | ||
Tree-based ortholog | many-to-many | CR14G01060 CR07G01830 CR01G03050 ... | 8 | ||
Citrullus lanatus | Orthologous gene family | many-to-1 | CL02G15790 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL02G15790 | 1 | ||
Tree-based ortholog | many-to-many | CL02G15790 CL08G07740 | 2 | ||
Citrus sinensis | Orthologous gene family | many-to-1 | CS00103G00310 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS00103G00310 | 1 | ||
Tree-based ortholog | many-to-many | CS00103G00310 CS00398G00160 | 2 | ||
Cucumis melo | Orthologous gene family | many-to-1 | CM00003G03520 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00003G03520 | 1 | ||
Tree-based ortholog | many-to-many | CM00003G03520 CM00040G00800 | 2 | ||
Eucalyptus grandis | Orthologous gene family | many-to-many | EG0002G15340 EG0614G00010 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | EG0002G15340 | 1 | ||
Tree-based ortholog | many-to-many | EG0614G00010 EG0002G15340 EG0007G21520 | 3 | ||
Fragaria vesca | Orthologous gene family | many-to-1 | FV6G05280 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FV6G05280 | 1 | ||
Tree-based ortholog | many-to-many | FV6G05280 FV7G14040 | 2 | ||
Glycine max | Orthologous gene family | many-to-many | GM03G39640 GM19G42270 GM20G37940 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | GM19G42270 GM03G39640 | 2 | ||
Tree-based ortholog | many-to-many | GM03G39640 GM19G42270 GM20G37940 ... | 5 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR07G29880 GR07G34200 GR13G12510 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GR07G29880 | 1 | ||
Tree-based ortholog | many-to-many | GR13G20530 GR13G12510 GR07G34200 ... | 5 | ||
Lotus japonicus | Orthologous gene family | many-to-1 | LJ5G029370 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | LJ5G029370 | 1 | ||
Tree-based ortholog | many-to-1 | LJ5G029370 | 1 | ||
Malus domestica | Orthologous gene family | many-to-many | MD04G016540 MD12G021990 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | MD12G021990 MD04G016540 | 2 | ||
Tree-based ortholog | many-to-many | MD12G021990 MD04G016540 | 2 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME03614G04910 ME11110G00080 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ME03614G04910 | 1 | ||
Tree-based ortholog | many-to-many | ME03614G04910 ME11110G00080 | 2 | ||
Medicago truncatula | Orthologous gene family | many-to-1 | MT7G113200 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MT7G113200 | 1 | ||
Tree-based ortholog | many-to-many | MT7G113200 MT1G090740 | 2 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS03G61930 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS03G61930 | 1 | ||
Tree-based ortholog | many-to-many | OS03G61930 OS12G35560 OS02G57690 | 3 | ||
Ostreococcus lucimarinus | Orthologous gene family | many-to-1 | OL15G02390 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL15G02390 | 1 | ||
Tree-based ortholog | many-to-1 | OL15G02390 | 1 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT05G02690 PT13G01880 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | PT13G01880 PT05G02690 | 2 | ||
Tree-based ortholog | many-to-many | PT13G01880 PT05G02690 PT08G03120 ... | 4 | ||
Prunus persica | Orthologous gene family | many-to-1 | PPE_006G32820 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPE_006G32820 | 1 | ||
Tree-based ortholog | many-to-many | PPE_006G32820 PPE_002G09150 | 2 | ||
Ricinus communis | Orthologous gene family | many-to-1 | RC30128G02000 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC30128G02000 | 1 | ||
Tree-based ortholog | many-to-many | RC30128G02000 RC28872G00060 | 2 | ||
Solanum lycopersicum | Orthologous gene family | many-to-1 | SL01G099350 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL01G099350 | 1 | ||
Tree-based ortholog | many-to-many | SL01G099350 SL11G007960 | 2 | ||
Solanum tuberosum | Orthologous gene family | many-to-1 | ST01G037180 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST01G037180 | 1 | ||
Tree-based ortholog | many-to-many | ST01G037180 ST11G010810 | 2 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP2G20800 TP3G04280 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP3G04280 | 1 | ||
Tree-based ortholog | many-to-many | TP2G20800 TP3G04280 TP6G38320 | 3 | ||
Theobroma cacao | Orthologous gene family | many-to-1 | TC0005G30870 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TC0005G30870 | 1 | ||
Tree-based ortholog | many-to-many | TC0005G30870 TC0010G08470 | 2 | ||
Vitis vinifera | Orthologous gene family | many-to-1 | VV14G08600 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV14G08600 | 1 | ||
Tree-based ortholog | many-to-many | VV14G08600 VV13G02370 | 2 | ||
Zea mays | Orthologous gene family | many-to-many | ZM01G58820 ZM09G13160 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM01G58820 | 1 | ||
Tree-based ortholog | many-to-many | ZM01G58820 ZM09G13160 ZM04G24760 | 3 |