Integrative Orthology Viewer: PP00046G00130 (Physcomitrella patens)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Physcomitrella patens | Orthologous gene family | PP00007G01040 PP00012G01130 PP00025G00590 ... | 25 | |
Best-Hits-and-Inparalogs(BHI)family | PP00066G00230 PP00161G00130 PP00012G01130 ... | 24 | ||
Tree-based ortholog | PP00352G00250 PP00046G00130 | 2 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00079G00180 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ATR_00054G00120 | 1 | ||
Tree-based ortholog | many-to-many | ATR_00079G00180 ATR_00054G00120 | 2 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-many | AL7G40120 AL7G40130 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AL2G14910 | 1 | ||
Tree-based ortholog | many-to-many | AL2G14910 AL7G40120 AL7G40130 | 3 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT1G67090 AT5G38410 AT5G38420 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT1G67090 | 1 | ||
Tree-based ortholog | many-to-many | AT1G67090 AT5G38430 AT5G38420 ... | 4 | ||
Beta vulgaris | Orthologous gene family | many-to-many | BV2G03210 BV2G07150 BV2G07160 ... | 5 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | BV2G07180 BV2G07150 BV2G07160 ... | 5 | ||
Tree-based ortholog | many-to-many | BV2G07180 BV2G07190 BV2G07150 ... | 5 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR02G00210 BR04G08160 BR04G11270 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | BR02G18180 BR02G18170 BR02G18210 | 3 | ||
Tree-based ortholog | many-to-many | BR04G08160 BR04G08230 BR04G11270 ... | 8 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_007G36250 CRU_007G36260 CRU_007G36270 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | CRU_007G36260 CRU_007G36270 CRU_007G36250 | 3 | ||
Tree-based ortholog | many-to-many | CRU_007G36260 CRU_007G36270 CRU_007G36250 ... | 4 | ||
Carica papaya | Orthologous gene family | many-to-many | CP00001G00380 CP00001G00390 CP00282G00140 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | CP00001G00390 CP00001G00380 | 2 | ||
Tree-based ortholog | many-to-many | CP00001G00390 CP00001G00380 CP00282G00140 ... | 4 | ||
Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | many-to-many | CR02G11640 CR02G11650 | 2 | |
Tree-based ortholog | many-to-many | CR02G11640 CR02G11650 | 2 | ||
Citrullus lanatus | Orthologous gene family | many-to-1 | CL05G23750 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL05G23750 | 1 | ||
Tree-based ortholog | many-to-1 | CL05G23750 | 1 | ||
Citrus sinensis | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS00475G00110 | 1 | |
Tree-based ortholog | many-to-1 | CS00475G00110 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-1 | CM00016G05880 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00016G05880 | 1 | ||
Tree-based ortholog | many-to-1 | CM00016G05880 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0011G18400 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | EG0002G24660 | 1 | ||
Tree-based ortholog | many-to-many | EG0010G13170 EG0002G24660 EG0011G18400 ... | 4 | ||
Fragaria vesca | Orthologous gene family | many-to-many | FV0G01600 FV6G21230 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FV0G01600 | 1 | ||
Tree-based ortholog | many-to-many | FV6G21230 FV0G01600 FV4G03370 | 3 | ||
Glycine max | Orthologous gene family | many-to-many | GM13G07610 GM19G06340 GM19G06370 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | GM13G07610 GM19G06340 GM19G06370 | 3 | ||
Tree-based ortholog | many-to-many | GM19G06340 GM19G06370 GM13G07610 ... | 9 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR01G20180 GR07G18130 GR07G18140 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | GR07G18140 GR01G20180 GR07G18130 | 3 | ||
Tree-based ortholog | many-to-many | GR07G18140 GR07G18130 GR01G20180 ... | 4 | ||
Lotus japonicus | Orthologous gene family | many-to-many | LJ1G040990 LJ1G041000 LJ2G003290 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | LJ1G041000 LJ1G040990 LJ2G003290 | 3 | ||
Tree-based ortholog | many-to-many | LJ2G003290 LJ1G040990 LJ1G041000 | 3 | ||
Malus domestica | Orthologous gene family | many-to-1 | MD09G023770 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MD09G023770 | 1 | ||
Tree-based ortholog | many-to-many | MD00G238420 MD16G001630 MD00G203920 ... | 8 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME06446G00120 ME10493G00020 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ME09294G00150 | 1 | ||
Tree-based ortholog | many-to-many | ME10493G00020 ME06446G00120 ME09294G00150 | 3 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT6G018300 MT6G018310 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | MT6G018310 MT6G018300 | 2 | ||
Tree-based ortholog | many-to-many | MT7G007200 MT7G007220 MT7G007120 ... | 8 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS12G17600 OS12G19381 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | OS12G17600 OS12G19381 | 2 | ||
Tree-based ortholog | many-to-many | OS12G19381 OS12G19470 OS12G17600 ... | 4 | ||
Ostreococcus lucimarinus | Orthologous gene family | many-to-many | OL17G01920 OL17G01930 OL17G01940 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | OL17G01940 OL17G01930 OL17G01920 | 3 | ||
Tree-based ortholog | many-to-many | OL17G01920 OL17G01940 OL17G01930 | 3 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT04G10000 PT17G11460 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | PT17G11460 PT04G10000 | 2 | ||
Tree-based ortholog | many-to-many | PT17G11460 PT04G10000 PT15G04720 ... | 4 | ||
Prunus persica | Orthologous gene family | many-to-1 | PPE_003G13890 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPE_003G13890 | 1 | ||
Tree-based ortholog | many-to-many | PPE_001G32080 PPE_003G13890 PPE_001G07770 | 3 | ||
Ricinus communis | Orthologous gene family | many-to-many | RC29974G00030 RC30167G00360 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC27524G00060 | 1 | ||
Tree-based ortholog | many-to-many | RC27524G00060 RC29974G00030 RC30167G00360 | 3 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL02G085950 SL03G034220 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | SL02G085950 SL03G034220 | 2 | ||
Tree-based ortholog | many-to-many | SL03G034220 SL02G085950 SL02G063150 ... | 4 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST02G010840 ST02G029110 ST02G029150 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | ST02G029160 ST02G029150 ST02G029110 | 3 | ||
Tree-based ortholog | many-to-many | ST02G029110 ST02G029160 ST02G029120 ... | 7 | ||
Thellungiella parvula | Orthologous gene family | many-to-1 | TP5G22020 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP5G22020 | 1 | ||
Tree-based ortholog | many-to-1 | TP5G22020 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-1 | TC0004G14060 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TC0009G17510 | 1 | ||
Tree-based ortholog | many-to-many | TC0002G22970 TC0002G22960 TC0004G14060 ... | 5 | ||
Vitis vinifera | Orthologous gene family | many-to-1 | VV17G05980 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV11G09120 | 1 | ||
Tree-based ortholog | many-to-many | VV17G05980 VV11G09120 | 2 | ||
Zea mays | Orthologous gene family | many-to-many | ZM02G24350 ZM04G30080 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | ZM04G30080 ZM02G24350 | 2 | ||
Tree-based ortholog | many-to-many | ZM02G24350 ZM04G30080 | 2 |