Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
PP00041G01590
(Physcomitrella patens)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | PP00041G01590 PP00014G01130 | 2 |  |
| Orthologous gene family | PP00014G01130 PP00041G01590 | 2 | ||
| Tree-based ortholog | PP00041G01590 PP00014G01130 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ATR_00182G00080 | 1 | |
| Orthologous gene family | many-to-1 | ATR_00182G00080 | 1 | ||
| Tree-based ortholog | many-to-1 | ATR_00182G00080 | 1 | ||
| Arabidopsis lyrata | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AL3G40540 | 1 | |
| Orthologous gene family | many-to-many | AL3G40540 AL7G06220 | 2 | ||
| Tree-based ortholog | many-to-many | AL3G40540 AL7G06220 | 2 | ||
| Arabidopsis thaliana | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT2G16500 | 1 | |
| Orthologous gene family | many-to-many | AT2G16500 AT4G34710 | 2 | ||
| Tree-based ortholog | many-to-many | AT2G16500 AT4G34710 | 2 | ||
| Beta vulgaris | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BV9G12320 | 1 | |
| Orthologous gene family | many-to-many | BV2G05390 BV9G12320 | 2 | ||
| Tree-based ortholog | many-to-many | BV9G12320 BV2G05390 | 2 | ||
| Brassica rapa | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BR03G54370 | 1 | |
| Orthologous gene family | many-to-many | BR01G03470 BR01G03480 BR03G54370 ... | 4 | ||
| Tree-based ortholog | many-to-many | BR01G03470 BR01G03480 BR03G54370 ... | 4 | ||
| Capsella rubella | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRU_003G29140 | 1 | |
| Orthologous gene family | many-to-1 | CRU_003G29140 | 1 | ||
| Tree-based ortholog | many-to-many | CRU_003G29140 CRU_007G05260 | 2 | ||
| Carica papaya | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00150G00130 | 1 | |
| Orthologous gene family | many-to-1 | CP00150G00130 | 1 | ||
| Tree-based ortholog | many-to-1 | CP00150G00130 | 1 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR01G10750 | 1 | |
| Citrullus lanatus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL11G15040 | 1 | |
| Orthologous gene family | many-to-1 | CL11G15040 | 1 | ||
| Tree-based ortholog | many-to-1 | CL11G15040 | 1 | ||
| Citrus sinensis | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS00748G00010 | 1 | |
| Orthologous gene family | many-to-1 | CS00748G00010 | 1 | ||
| Tree-based ortholog | many-to-1 | CS00748G00010 | 1 | ||
| Cucumis melo | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00059G01820 | 1 | |
| Orthologous gene family | many-to-1 | CM00059G01820 | 1 | ||
| Tree-based ortholog | many-to-1 | CM00059G01820 | 1 | ||
| Eucalyptus grandis | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | EG0007G12730 | 1 | |
| Orthologous gene family | many-to-1 | EG0007G12730 | 1 | ||
| Tree-based ortholog | many-to-1 | EG0007G12730 | 1 | ||
| Fragaria vesca | Best-Hits-and-Inparalogs(BHI)family | many-to-many | FV7G00530 FV2G17410 | 2 | |
| Orthologous gene family | many-to-many | FV2G17410 FV7G00530 | 2 | ||
| Tree-based ortholog | many-to-many | FV7G00530 FV2G17410 | 2 | ||
| Glycine max | Best-Hits-and-Inparalogs(BHI)family | many-to-many | GM04G00960 GM06G00990 | 2 | |
| Orthologous gene family | many-to-many | GM04G00960 GM06G00990 | 2 | ||
| Tree-based ortholog | many-to-many | GM04G00960 GM06G00990 | 2 | ||
| Gossypium raimondii | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GR12G15410 | 1 | |
| Orthologous gene family | many-to-many | GR02G14930 GR05G24870 GR12G15410 | 3 | ||
| Tree-based ortholog | many-to-many | GR02G14930 GR05G24870 GR12G15410 | 3 | ||
| Lotus japonicus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | LJ3G047760 | 1 | |
| Orthologous gene family | many-to-1 | LJ3G047760 | 1 | ||
| Tree-based ortholog | many-to-1 | LJ3G047760 | 1 | ||
| Malus domestica | Best-Hits-and-Inparalogs(BHI)family | many-to-many | MD00G081920 MD00G505240 | 2 | |
| Orthologous gene family | many-to-many | MD00G081920 MD00G505240 | 2 | ||
| Tree-based ortholog | many-to-many | MD00G360710 MD00G081920 MD00G505240 | 3 | ||
| Manihot esculenta | Best-Hits-and-Inparalogs(BHI)family | many-to-many | ME08765G00090 ME02994G00100 | 2 | |
| Orthologous gene family | many-to-many | ME02994G00100 ME08765G00090 | 2 | ||
| Tree-based ortholog | many-to-many | ME02994G00100 ME08765G00090 | 2 | ||
| Medicago truncatula | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MT4G072020 | 1 | |
| Orthologous gene family | many-to-1 | MT4G072020 | 1 | ||
| Tree-based ortholog | many-to-1 | MT4G072020 | 1 | ||
| Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS06G04070 | 1 | |
| Orthologous gene family | many-to-1 | OS06G04070 | 1 | ||
| Tree-based ortholog | many-to-many | OS04G01690 OS06G04070 | 2 | ||
| Populus trichocarpa | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PT04G16330 | 1 | |
| Orthologous gene family | many-to-1 | PT04G16330 | 1 | ||
| Tree-based ortholog | many-to-1 | PT04G16330 | 1 | ||
| Prunus persica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPE_008G10090 | 1 | |
| Orthologous gene family | many-to-1 | PPE_008G10090 | 1 | ||
| Tree-based ortholog | many-to-1 | PPE_008G10090 | 1 | ||
| Ricinus communis | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC30131G02860 | 1 | |
| Orthologous gene family | many-to-1 | RC30131G02860 | 1 | ||
| Tree-based ortholog | many-to-1 | RC30131G02860 | 1 | ||
| Solanum lycopersicum | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL10G054440 | 1 | |
| Orthologous gene family | many-to-1 | SL10G054440 | 1 | ||
| Tree-based ortholog | many-to-1 | SL10G054440 | 1 | ||
| Solanum tuberosum | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST10G017730 | 1 | |
| Orthologous gene family | many-to-1 | ST10G017730 | 1 | ||
| Tree-based ortholog | many-to-many | ST10G017730 ST01G047890 | 2 | ||
| Thellungiella parvula | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP3G29770 | 1 | |
| Orthologous gene family | many-to-many | TP3G29770 TP7G32490 | 2 | ||
| Tree-based ortholog | many-to-many | TP3G29770 TP7G32490 | 2 | ||
| Theobroma cacao | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TC0002G07110 | 1 | |
| Orthologous gene family | many-to-1 | TC0002G07110 | 1 | ||
| Tree-based ortholog | many-to-many | TC0004G20710 TC0002G07110 | 2 | ||
| Vitis vinifera | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV03G05830 | 1 | |
| Orthologous gene family | many-to-1 | VV03G05830 | 1 | ||
| Tree-based ortholog | many-to-1 | VV03G05830 | 1 | ||
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM09G05680 | 1 | |
| Orthologous gene family | many-to-1 | ZM09G05680 | 1 | ||
| Tree-based ortholog | many-to-many | ZM04G19370 ZM09G05680 | 2 |