Integrative Orthology Viewer: PP00039G00280 (Physcomitrella patens)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Physcomitrella patens | Orthologous gene family | PP00036G00610 PP00039G00280 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | PP00039G00280 | 1 | ||
Tree-based ortholog | PP00036G00610 PP00059G01140 PP00039G00280 | 3 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00030G01540 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00030G01540 | 1 | ||
Tree-based ortholog | many-to-many | ATR_00034G00470 ATR_00154G00130 ATR_00013G01310 ... | 9 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-many | AL6G02760 AL8G16690 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL6G02760 | 1 | ||
Tree-based ortholog | many-to-many | AL3G09700 AL3G09690 AL5G25250 ... | 22 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT5G03540 AT5G52340 AT5G52350 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT5G52340 | 1 | ||
Tree-based ortholog | many-to-many | AT3G09530 AT3G09520 AT3G55150 ... | 23 | ||
Beta vulgaris | Orthologous gene family | many-to-many | BV0G26220 BV7G10890 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV0G26220 | 1 | ||
Tree-based ortholog | many-to-many | BV7G07260 BV0G76020 BV2G01660 ... | 12 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR02G16440 BR10G27880 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR02G16440 | 1 | ||
Tree-based ortholog | many-to-many | BR03G31510 BR01G38920 BR05G32660 ... | 36 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_006G02320 CRU_008G12240 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_008G12240 | 1 | ||
Tree-based ortholog | many-to-many | CRU_003G08230 CRU_005G20510 CRU_008G19820 ... | 21 | ||
Carica papaya | Orthologous gene family | many-to-many | CP00054G00140 CP00104G00340 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00104G00340 | 1 | ||
Tree-based ortholog | many-to-many | CP00114G00080 CP00001G03050 CP30198G00010 ... | 13 | ||
Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR10G00900 | 1 | |
Tree-based ortholog | many-to-1 | CR10G00900 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-many | CL01G08890 CL05G22950 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL05G22950 | 1 | ||
Tree-based ortholog | many-to-many | CL10G18790 CL04G08400 CL02G13880 ... | 18 | ||
Citrus sinensis | Orthologous gene family | many-to-many | CS00018G00940 CS00539G00080 CS00539G00090 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00018G00940 | 1 | ||
Tree-based ortholog | many-to-many | CS00227G00060 CS00024G01360 CS00014G01090 ... | 15 | ||
Cucumis melo | Orthologous gene family | many-to-1 | CM00016G06790 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00016G06790 | 1 | ||
Tree-based ortholog | many-to-many | CM00011G02140 CM00002G00270 CM00063G00180 ... | 17 | ||
Eucalyptus grandis | Orthologous gene family | many-to-many | EG0001G21870 EG0010G02450 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0001G21870 | 1 | ||
Tree-based ortholog | many-to-many | EG0011G26720 EG0007G21760 EG0010G18140 ... | 20 | ||
Fragaria vesca | Orthologous gene family | many-to-many | FV6G29360 FV7G15400 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV6G29360 | 1 | ||
Tree-based ortholog | many-to-many | FV6G14020 FV6G14000 FV7G25390 ... | 16 | ||
Glycine max | Orthologous gene family | many-to-many | GM10G23810 GM10G34000 GM20G17500 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM10G34000 GM20G33590 | 2 | ||
Tree-based ortholog | many-to-many | GM19G35880 GM03G33160 GM10G05280 ... | 47 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR06G14990 GR11G22960 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR11G22960 | 1 | ||
Tree-based ortholog | many-to-many | GR02G25320 GR09G42270 GR07G37500 ... | 26 | ||
Lotus japonicus | Orthologous gene family | many-to-many | LJ5G029210 LJ5G029230 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ4G025880 | 1 | ||
Tree-based ortholog | many-to-many | LJ1G063320 LJ1G038380 LJ4G025880 ... | 9 | ||
Malus domestica | Orthologous gene family | many-to-many | MD00G097460 MD00G279850 MD00G284510 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD00G097460 | 1 | ||
Tree-based ortholog | many-to-many | MD00G082240 MD12G012520 MD00G364670 ... | 32 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME04002G00110 ME06693G00020 ME11279G00380 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME11279G00380 | 1 | ||
Tree-based ortholog | many-to-many | ME12033G00010 ME00687G00010 ME03606G00090 ... | 25 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT1G057560 MT1G090620 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT1G090620 | 1 | ||
Tree-based ortholog | many-to-many | MT1G067460 MT1G067480 MT4G062330 ... | 30 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS04G58880 OS11G05880 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS11G05880 | 1 | ||
Tree-based ortholog | many-to-many | OS12G01040 OS11G01050 OS11G42989 ... | 35 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT06G20390 PT08G01780 PT10G24180 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT16G07100 PT06G20390 | 2 | ||
Tree-based ortholog | many-to-many | PT06G21430 PT08G04870 PT10G21240 ... | 29 | ||
Prunus persica | Orthologous gene family | many-to-many | PPE_004G28330 PPE_007G11810 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_004G28330 | 1 | ||
Tree-based ortholog | many-to-many | PPE_006G25510 PPE_006G08500 PPE_005G20890 ... | 14 | ||
Ricinus communis | Orthologous gene family | many-to-many | RC29439G00060 RC30184G00180 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29439G00060 | 1 | ||
Tree-based ortholog | many-to-many | RC29469G00030 RC29587G00020 RC29163G00010 ... | 15 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL04G009740 SL10G081940 SL11G006620 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL04G009740 | 1 | ||
Tree-based ortholog | many-to-many | SL06G005280 SL06G075610 SL11G073010 ... | 22 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST10G026170 ST11G011180 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST11G011180 | 1 | ||
Tree-based ortholog | many-to-many | ST06G005580 ST06G031510 ST11G029860 ... | 21 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP6G14590 TP6G39210 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP6G14590 | 1 | ||
Tree-based ortholog | many-to-many | TP3G07880 TP3G07870 TP5G07270 ... | 20 | ||
Theobroma cacao | Orthologous gene family | many-to-many | TC0005G10150 TC0010G11500 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0005G10150 | 1 | ||
Tree-based ortholog | many-to-many | TC0005G04550 TC0010G05660 TC0009G32390 ... | 15 | ||
Vitis vinifera | Orthologous gene family | many-to-many | VV08G12840 VV13G11320 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV13G11320 | 1 | ||
Tree-based ortholog | many-to-many | VV08G02160 VV06G04280 VV17G02630 ... | 14 | ||
Zea mays | Orthologous gene family | many-to-many | ZM02G00020 ZM02G00030 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM03G22790 ZM08G28970 | 2 | ||
Tree-based ortholog | many-to-many | ZM05G44920 ZM03G31070 ZM05G28740 ... | 30 |