Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
PP00025G00400
(Physcomitrella patens)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | PP00037G01280 PP00025G00400 PP00002G00540 | 3 |  |
| Orthologous gene family | PP00002G00540 PP00025G00400 PP00037G01280 | 3 | ||
| Tree-based ortholog | PP00037G01280 PP00025G00400 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ATR_00062G00410 | 1 | |
| Orthologous gene family | many-to-1 | ATR_00224G00100 | 1 | ||
| Arabidopsis lyrata | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AL1G43570 | 1 | |
| Orthologous gene family | many-to-1 | AL1G43570 | 1 | ||
| Tree-based ortholog | many-to-1 | AL1G43570 | 1 | ||
| Arabidopsis thaliana | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT1G64660 | 1 | |
| Orthologous gene family | many-to-1 | AT1G64660 | 1 | ||
| Tree-based ortholog | many-to-1 | AT1G64660 | 1 | ||
| Beta vulgaris | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BV5G10840 | 1 | |
| Orthologous gene family | many-to-1 | BV5G10840 | 1 | ||
| Tree-based ortholog | many-to-1 | BV5G10840 | 1 | ||
| Brassica rapa | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BR09G12080 | 1 | |
| Orthologous gene family | many-to-1 | BR09G12080 | 1 | ||
| Tree-based ortholog | many-to-1 | BR09G12080 | 1 | ||
| Capsella rubella | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRU_002G00090 | 1 | |
| Orthologous gene family | many-to-1 | CRU_002G00090 | 1 | ||
| Tree-based ortholog | many-to-1 | CRU_002G00090 | 1 | ||
| Carica papaya | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00948G00010 | 1 | |
| Orthologous gene family | many-to-1 | CP00948G00010 | 1 | ||
| Tree-based ortholog | many-to-1 | CP00948G00010 | 1 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR10G01920 | 1 | |
| Orthologous gene family | many-to-1 | CR10G01920 | 1 | ||
| Tree-based ortholog | many-to-1 | CR10G01920 | 1 | ||
| Citrullus lanatus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL01G01350 | 1 | |
| Orthologous gene family | many-to-many | CL01G01350 CL10G01350 | 2 | ||
| Tree-based ortholog | many-to-many | CL10G01350 CL01G01350 | 2 | ||
| Citrus sinensis | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS00009G02930 | 1 | |
| Orthologous gene family | many-to-1 | CS00009G02930 | 1 | ||
| Tree-based ortholog | many-to-1 | CS00009G02930 | 1 | ||
| Cucumis melo | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00021G00810 | 1 | |
| Orthologous gene family | many-to-many | CM00005G07640 CM00021G00810 | 2 | ||
| Tree-based ortholog | many-to-many | CM00021G00810 CM00005G07640 | 2 | ||
| Eucalyptus grandis | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | EG0004G13460 | 1 | |
| Orthologous gene family | many-to-1 | EG0004G13460 | 1 | ||
| Tree-based ortholog | many-to-1 | EG0004G13460 | 1 | ||
| Fragaria vesca | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FV0G41920 | 1 | |
| Orthologous gene family | many-to-1 | FV0G41920 | 1 | ||
| Tree-based ortholog | many-to-1 | FV0G41920 | 1 | ||
| Glycine max | Best-Hits-and-Inparalogs(BHI)family | many-to-many | GM13G10360 GM02G09650 | 2 | |
| Orthologous gene family | many-to-many | GM02G09650 GM10G31590 GM13G10360 | 3 | ||
| Tree-based ortholog | many-to-many | GM10G31590 GM13G10360 GM02G09650 | 3 | ||
| Gossypium raimondii | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GR08G25850 | 1 | |
| Orthologous gene family | many-to-many | GR06G20580 GR08G25850 | 2 | ||
| Tree-based ortholog | many-to-many | GR06G20570 GR06G20580 GR08G25850 | 3 | ||
| Lotus japonicus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | LJ5G023210 | 1 | |
| Orthologous gene family | many-to-1 | LJ5G023210 | 1 | ||
| Tree-based ortholog | many-to-1 | LJ5G023210 | 1 | ||
| Malus domestica | Best-Hits-and-Inparalogs(BHI)family | many-to-many | MD13G011280 MD06G010810 | 2 | |
| Orthologous gene family | many-to-many | MD06G010810 MD13G011280 | 2 | ||
| Tree-based ortholog | many-to-many | MD10G021440 MD00G058500 MD13G011280 ... | 4 | ||
| Manihot esculenta | Best-Hits-and-Inparalogs(BHI)family | many-to-many | ME00977G00020 ME07267G00010 | 2 | |
| Orthologous gene family | many-to-many | ME00977G00020 ME07267G00010 | 2 | ||
| Tree-based ortholog | many-to-many | ME00977G00020 ME07267G00010 | 2 | ||
| Medicago truncatula | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MT1G077890 | 1 | |
| Orthologous gene family | many-to-many | MT1G077890 MT3G080850 | 2 | ||
| Tree-based ortholog | many-to-many | MT1G077890 MT3G080850 | 2 | ||
| Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS10G37340 | 1 | |
| Orthologous gene family | many-to-1 | OS10G37340 | 1 | ||
| Tree-based ortholog | many-to-1 | OS10G37340 | 1 | ||
| Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL09G00960 | 1 | |
| Populus trichocarpa | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PT01G08400 | 1 | |
| Orthologous gene family | many-to-many | PT01G08400 PT03G18700 PT03G18710 ... | 4 | ||
| Tree-based ortholog | many-to-many | PT01G08400 PT03G14660 PT03G18710 ... | 5 | ||
| Prunus persica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPE_005G13820 | 1 | |
| Orthologous gene family | many-to-1 | PPE_005G13820 | 1 | ||
| Tree-based ortholog | many-to-1 | PPE_005G13820 | 1 | ||
| Ricinus communis | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC30068G00660 | 1 | |
| Orthologous gene family | many-to-1 | RC30068G00660 | 1 | ||
| Tree-based ortholog | many-to-1 | RC30068G00660 | 1 | ||
| Solanum lycopersicum | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL08G083110 | 1 | |
| Orthologous gene family | many-to-many | SL08G008580 SL08G083110 | 2 | ||
| Tree-based ortholog | many-to-many | SL08G008580 SL08G083110 | 2 | ||
| Solanum tuberosum | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST08G027190 | 1 | |
| Orthologous gene family | many-to-many | ST08G009010 ST08G027190 | 2 | ||
| Tree-based ortholog | many-to-many | ST08G009010 ST08G027190 | 2 | ||
| Thellungiella parvula | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP2G00050 | 1 | |
| Orthologous gene family | many-to-1 | TP2G00050 | 1 | ||
| Tree-based ortholog | many-to-1 | TP2G00050 | 1 | ||
| Theobroma cacao | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TC0003G22010 | 1 | |
| Orthologous gene family | many-to-1 | TC0003G22010 | 1 | ||
| Tree-based ortholog | many-to-1 | TC0003G22010 | 1 | ||
| Vitis vinifera | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV14G02480 | 1 | |
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | many-to-many | ZM01G40140 ZM05G08820 | 2 | |
| Orthologous gene family | many-to-many | ZM01G40140 ZM05G08820 | 2 | ||
| Tree-based ortholog | many-to-many | ZM05G08820 ZM01G40140 | 2 |