Integrative Orthology Viewer: PP00011G00860 (Physcomitrella patens)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | PP00335G00390 PP00005G01140 PP00011G00860 | 3 | |
Orthologous gene family | PP00001G03320 PP00005G01140 PP00011G00860 ... | 6 | ||
Tree-based ortholog | PP00335G00390 PP00005G01140 PP00011G00860 | 3 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ATR_00010G03790 | 1 | |
Tree-based ortholog | many-to-1 | ATR_00010G03790 | 1 | ||
Arabidopsis lyrata | Best-Hits-and-Inparalogs(BHI)family | many-to-many | AL1G44410 AL8G05560 | 2 | |
Orthologous gene family | many-to-1 | AL2G08400 | 1 | ||
Tree-based ortholog | many-to-many | AL1G44410 AL8G05560 AL3G21290 | 3 | ||
Arabidopsis thaliana | Best-Hits-and-Inparalogs(BHI)family | many-to-many | AT1G50010 AT1G04820 | 2 | |
Orthologous gene family | many-to-1 | AT1G64740 | 1 | ||
Tree-based ortholog | many-to-many | AT1G50010 AT1G04820 AT4G14960 | 3 | ||
Beta vulgaris | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BV6G15010 | 1 | |
Orthologous gene family | many-to-many | BV0G10250 BV0G44960 | 2 | ||
Tree-based ortholog | many-to-1 | BV6G15010 | 1 | ||
Brassica rapa | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BR08G03140 | 1 | |
Orthologous gene family | many-to-many | BR02G09740 BR10G15220 | 2 | ||
Tree-based ortholog | many-to-many | BR08G03140 BR06G03240 BR00G01550 | 3 | ||
Capsella rubella | Best-Hits-and-Inparalogs(BHI)family | many-to-many | CRU_151G00030 CRU_001G37260 | 2 | |
Orthologous gene family | many-to-many | CRU_002G09090 CRU_006G17650 | 2 | ||
Tree-based ortholog | many-to-many | CRU_151G00030 CRU_001G37260 | 2 | ||
Carica papaya | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00160G00090 | 1 | |
Orthologous gene family | many-to-many | CP00051G01370 CP00119G00500 | 2 | ||
Tree-based ortholog | many-to-many | CP00129G00410 CP00160G00090 | 2 | ||
Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | many-to-many | CR04G00210 CR03G10780 | 2 | |
Tree-based ortholog | many-to-many | CR03G10780 CR04G00210 | 2 | ||
Citrullus lanatus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL01G18250 | 1 | |
Orthologous gene family | many-to-many | CL02G07210 CL02G24370 CL10G08260 ... | 4 | ||
Tree-based ortholog | many-to-many | CL02G07210 CL10G08260 CL05G25530 ... | 4 | ||
Citrus sinensis | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS00236G00160 | 1 | |
Orthologous gene family | many-to-many | CS00006G00370 CS00117G00220 CS00123G00130 | 3 | ||
Tree-based ortholog | many-to-1 | CS00015G01570 | 1 | ||
Cucumis melo | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00034G01480 | 1 | |
Orthologous gene family | many-to-many | CM00022G05540 CM00098G00370 | 2 | ||
Tree-based ortholog | many-to-many | CM00034G01480 CM00031G05100 CM00007G07010 | 3 | ||
Eucalyptus grandis | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | EG0007G08660 | 1 | |
Orthologous gene family | many-to-many | EG0001G17550 EG0002G30080 EG0006G17790 | 3 | ||
Tree-based ortholog | many-to-many | EG0006G17790 EG0006G04100 EG0007G08660 | 3 | ||
Fragaria vesca | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FV2G02770 | 1 | |
Orthologous gene family | many-to-1 | FV3G37350 | 1 | ||
Tree-based ortholog | many-to-1 | FV6G44910 | 1 | ||
Glycine max | Best-Hits-and-Inparalogs(BHI)family | many-to-many | GM10G40150 GM20G27280 | 2 | |
Orthologous gene family | many-to-many | GM05G29000 GM08G12140 GM16G04420 ... | 6 | ||
Tree-based ortholog | many-to-many | GM01G40550 GM11G04750 | 2 | ||
Gossypium raimondii | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GR12G14700 | 1 | |
Orthologous gene family | many-to-many | GR07G08640 GR07G26100 GR07G34600 ... | 7 | ||
Tree-based ortholog | many-to-many | GR08G08740 GR05G09780 GR01G25560 ... | 6 | ||
Lotus japonicus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | LJ4G041450 | 1 | |
Orthologous gene family | many-to-many | LJ1G054420 LJ4G041450 | 2 | ||
Tree-based ortholog | many-to-1 | LJ1G064570 | 1 | ||
Malus domestica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MD09G003540 | 1 | |
Orthologous gene family | many-to-many | MD00G342470 MD00G472840 MD12G000530 | 3 | ||
Tree-based ortholog | many-to-many | MD09G003540 MD17G003880 | 2 | ||
Manihot esculenta | Best-Hits-and-Inparalogs(BHI)family | many-to-many | ME07708G00040 ME08463G00010 ME08463G00020 | 3 | |
Orthologous gene family | many-to-many | ME03614G02220 ME04020G00100 ME06582G01240 | 3 | ||
Tree-based ortholog | many-to-many | ME04020G00100 ME07708G00040 ME08463G00010 ... | 4 | ||
Medicago truncatula | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MT4G097830 | 1 | |
Orthologous gene family | many-to-many | MT2G041400 MT2G041670 MT6G029190 ... | 5 | ||
Tree-based ortholog | many-to-many | MT1G106005 MT3G110720 | 2 | ||
Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS03G51600 | 1 | |
Orthologous gene family | many-to-1 | OS03G11970 | 1 | ||
Tree-based ortholog | many-to-many | OS03G51600 OS11G14220 | 2 | ||
Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | many-to-many | OL12G01340 OL08G03660 | 2 | |
Orthologous gene family | many-to-1 | OL12G01340 | 1 | ||
Tree-based ortholog | many-to-many | OL08G03660 OL12G01340 | 2 | ||
Populus trichocarpa | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PT17G08100 PT01G28950 | 2 | |
Orthologous gene family | many-to-many | PT01G00460 PT03G22030 PT13G05680 ... | 4 | ||
Tree-based ortholog | many-to-1 | PT17G08100 | 1 | ||
Prunus persica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPE_003G24810 | 1 | |
Orthologous gene family | many-to-1 | PPE_007G02890 | 1 | ||
Tree-based ortholog | many-to-1 | PPE_003G24810 | 1 | ||
Ricinus communis | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC29822G01690 | 1 | |
Orthologous gene family | many-to-1 | RC29950G00040 | 1 | ||
Tree-based ortholog | many-to-1 | RC29822G01690 | 1 | ||
Solanum lycopersicum | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL02G087880 | 1 | |
Tree-based ortholog | many-to-many | SL02G091870 SL04G077020 SL08G006890 ... | 5 | ||
Solanum tuberosum | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST04G029950 | 1 | |
Orthologous gene family | many-to-1 | ST02G010740 | 1 | ||
Tree-based ortholog | many-to-many | ST02G030350 ST02G010740 ST04G029950 ... | 6 | ||
Thellungiella parvula | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP4G01790 | 1 | |
Tree-based ortholog | many-to-1 | TP4G01790 | 1 | ||
Theobroma cacao | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TC0004G08310 | 1 | |
Orthologous gene family | many-to-many | TC0005G24860 TC0009G20360 | 2 | ||
Tree-based ortholog | many-to-1 | TC0004G08310 | 1 | ||
Vitis vinifera | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV08G08540 | 1 | |
Orthologous gene family | many-to-many | VV00G17120 VV03G09220 VV06G07590 ... | 6 | ||
Tree-based ortholog | many-to-many | VV18G05240 VV14G01920 VV03G09220 ... | 4 | ||
Zea mays | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM05G04960 | 1 | |
Orthologous gene family | many-to-many | ZM01G51400 ZM02G37450 ZM05G03360 ... | 5 | ||
Tree-based ortholog | many-to-many | ZM05G04960 ZM01G51400 ZM05G03360 ... | 8 |