Integrative Orthology Viewer: OS12G41160 (Oryza sativa ssp. japonica)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Oryza sativa ssp. japonica | Orthologous gene family | OS12G41160 | 1 | |
Anchor point | OS03G43580 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | OS12G41160 | 1 | ||
Tree-based ortholog | OS03G43580 OS12G41160 | 2 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Anchor point | 1-to-1 | ATR_00002G06140 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00002G06140 | 1 | ||
Tree-based ortholog | many-to-1 | ATR_00002G06140 | 1 | ||
Arabidopsis lyrata | Anchor point | 1-to-1 | AL7G29330 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL7G29330 | 1 | ||
Tree-based ortholog | many-to-1 | AL7G29330 | 1 | ||
Arabidopsis thaliana | Anchor point | 1-to-1 | AT4G14750 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT4G14750 | 1 | ||
Tree-based ortholog | many-to-1 | AT4G14750 | 1 | ||
Beta vulgaris | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV0G53890 | 1 | |
Tree-based ortholog | many-to-1 | BV0G53890 | 1 | ||
Brassica rapa | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR08G07150 | 1 | |
Tree-based ortholog | many-to-many | BR08G07150 BR01G21080 | 2 | ||
Capsella rubella | Anchor point | 1-to-1 | CRU_007G26220 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_007G26220 | 1 | ||
Tree-based ortholog | many-to-1 | CRU_007G26220 | 1 | ||
Carica papaya | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00044G01100 | 1 | |
Tree-based ortholog | many-to-many | CP00044G01100 CP00117G00750 | 2 | ||
Citrullus lanatus | Anchor point | 1-to-many | CL05G05400 CL06G06180 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL05G05400 | 1 | ||
Tree-based ortholog | many-to-many | CL05G05400 CL06G06180 CL02G16760 | 3 | ||
Citrus sinensis | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00011G00220 | 1 | |
Tree-based ortholog | many-to-1 | CS00011G00220 | 1 | ||
Cucumis melo | Anchor point | 1-to-1 | CM00022G00960 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00006G06080 | 1 | ||
Tree-based ortholog | many-to-many | CM00006G06080 CM00022G00960 CM00003G04920 | 3 | ||
Eucalyptus grandis | Anchor point | 1-to-1 | EG0008G35450 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | EG0002G07700 EG0002G08470 | 2 | ||
Tree-based ortholog | many-to-many | EG0002G08470 EG0002G07700 EG0008G35450 | 3 | ||
Fragaria vesca | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV4G05710 | 1 | |
Tree-based ortholog | many-to-many | FV4G05710 FV0G25150 | 2 | ||
Glycine max | Anchor point | 1-to-1 | GM02G00710 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM02G00710 GM10G00630 | 2 | ||
Tree-based ortholog | many-to-many | GM20G28800 GM10G39030 GM02G00710 ... | 6 | ||
Gossypium raimondii | Anchor point | 1-to-1 | GR13G20140 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR06G24180 | 1 | ||
Tree-based ortholog | many-to-many | GR06G24180 GR11G16770 GR13G20140 | 3 | ||
Lotus japonicus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ5G034640 | 1 | |
Tree-based ortholog | many-to-1 | LJ5G034640 | 1 | ||
Malus domestica | Anchor point | 1-to-1 | MD13G019590 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD13G019590 MD00G508060 | 2 | ||
Tree-based ortholog | many-to-many | MD13G019590 MD00G508060 MD00G102920 ... | 5 | ||
Manihot esculenta | Anchor point | 1-to-many | ME10563G00280 ME03802G00860 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME01551G01800 | 1 | ||
Tree-based ortholog | many-to-many | ME01551G01800 ME10563G00280 ME03802G00860 | 3 | ||
Medicago truncatula | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT1G041430 | 1 | |
Tree-based ortholog | many-to-many | MT1G103070 MT1G041430 MT7G114870 | 3 | ||
Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00234G00290 PP00147G00300 PP00244G00090 ... | 5 | |
Tree-based ortholog | many-to-many | PP00372G00060 PP00287G00200 PP00060G00500 | 3 | ||
Populus trichocarpa | Anchor point | 1-to-many | PT05G05150 PT08G15670 PT13G03890 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT10G08260 PT08G15670 | 2 | ||
Tree-based ortholog | many-to-many | PT08G15670 PT10G08260 PT05G05150 | 3 | ||
Prunus persica | Anchor point | 1-to-1 | PPE_001G01950 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_003G04330 | 1 | ||
Tree-based ortholog | many-to-1 | PPE_001G01950 | 1 | ||
Ricinus communis | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29844G00760 | 1 | |
Tree-based ortholog | many-to-many | RC29844G00760 RC30128G00170 | 2 | ||
Solanum lycopersicum | Anchor point | 1-to-1 | SL09G082560 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL09G082560 | 1 | ||
Tree-based ortholog | many-to-1 | SL09G082560 | 1 | ||
Solanum tuberosum | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST09G024580 | 1 | |
Tree-based ortholog | many-to-1 | ST09G024580 | 1 | ||
Thellungiella parvula | Anchor point | 1-to-1 | TP7G12880 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP7G12880 | 1 | ||
Tree-based ortholog | many-to-1 | TP7G12880 | 1 | ||
Theobroma cacao | Anchor point | 1-to-many | TC0004G24010 TC0005G28580 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0004G24010 | 1 | ||
Tree-based ortholog | many-to-many | TC0004G24010 TC0005G28580 | 2 | ||
Vitis vinifera | Anchor point | 1-to-many | VV14G03390 VV05G05350 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV05G05350 | 1 | ||
Tree-based ortholog | many-to-many | VV05G05350 VV14G03390 | 2 | ||
Zea mays | Orthologous gene family | 1-to-1 | ZM03G16140 | 1 | |
Anchor point | 1-to-many | ZM03G16140 ZM01G46890 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM03G16140 | 1 | ||
Tree-based ortholog | many-to-1 | ZM01G46890 | 1 |