Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
OS12G01290
(Oryza sativa ssp. japonica)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Oryza sativa ssp. japonica | Orthologous gene family | OS12G01290 | 1 |  |
| Best-Hits-and-Inparalogs(BHI)family | OS12G01180 OS11G01180 OS12G01290 | 3 | ||
| Tree-based ortholog | OS12G01180 OS11G01180 OS12G01290 | 3 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ATR_00117G00010 | 1 | |
| Tree-based ortholog | many-to-1 | ATR_00117G00010 | 1 | ||
| Arabidopsis lyrata | Best-Hits-and-Inparalogs(BHI)family | many-to-many | AL8G26430 AL0G07640 | 2 | |
| Tree-based ortholog | many-to-many | AL8G26430 AL0G07640 | 2 | ||
| Arabidopsis thaliana | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT5G60190 | 1 | |
| Tree-based ortholog | many-to-1 | AT5G60190 | 1 | ||
| Beta vulgaris | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BV9G05670 | 1 | |
| Tree-based ortholog | many-to-many | BV9G05670 BV8G00110 BV0G05550 ... | 4 | ||
| Brassica rapa | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BR03G10120 | 1 | |
| Tree-based ortholog | many-to-many | BR03G10120 BR10G12780 | 2 | ||
| Capsella rubella | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRU_008G20330 | 1 | |
| Tree-based ortholog | many-to-1 | CRU_008G20330 | 1 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR01G11780 | 1 | |
| Tree-based ortholog | many-to-1 | CR01G11780 | 1 | ||
| Citrullus lanatus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL02G20950 | 1 | |
| Tree-based ortholog | many-to-1 | CL02G20950 | 1 | ||
| Citrus sinensis | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS00014G01660 | 1 | |
| Tree-based ortholog | many-to-1 | CS00014G01660 | 1 | ||
| Cucumis melo | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00082G00550 | 1 | |
| Tree-based ortholog | many-to-1 | CM00082G00550 | 1 | ||
| Eucalyptus grandis | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | EG0010G08480 | 1 | |
| Tree-based ortholog | many-to-1 | EG0010G08480 | 1 | ||
| Fragaria vesca | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FV3G29980 | 1 | |
| Tree-based ortholog | many-to-many | FV3G29980 FV4G23140 FV6G44770 | 3 | ||
| Glycine max | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GM12G07730 | 1 | |
| Tree-based ortholog | many-to-1 | GM12G07730 | 1 | ||
| Gossypium raimondii | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GR09G07950 | 1 | |
| Tree-based ortholog | many-to-1 | GR09G07950 | 1 | ||
| Malus domestica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MD00G099590 | 1 | |
| Tree-based ortholog | many-to-many | MD00G099590 MD00G407080 MD16G007970 | 3 | ||
| Manihot esculenta | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ME00506G00110 | 1 | |
| Tree-based ortholog | many-to-many | ME03750G00570 ME00506G00110 | 2 | ||
| Medicago truncatula | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MT4G061080 | 1 | |
| Tree-based ortholog | many-to-1 | MT4G061080 | 1 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PP00167G00800 | 1 | |
| Tree-based ortholog | many-to-1 | PP00167G00800 | 1 | ||
| Populus trichocarpa | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PT13G00270 | 1 | |
| Tree-based ortholog | many-to-1 | PT13G00270 | 1 | ||
| Prunus persica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPE_006G09100 | 1 | |
| Tree-based ortholog | many-to-many | PPE_006G09100 PPE_001G35910 | 2 | ||
| Ricinus communis | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC29688G00050 | 1 | |
| Tree-based ortholog | many-to-many | RC29688G00050 RC30157G00130 RC30157G00140 | 3 | ||
| Solanum lycopersicum | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL05G005310 | 1 | |
| Tree-based ortholog | many-to-1 | SL05G005310 | 1 | ||
| Solanum tuberosum | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST05G013550 | 1 | |
| Tree-based ortholog | many-to-1 | ST05G013550 | 1 | ||
| Thellungiella parvula | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP6G21820 | 1 | |
| Tree-based ortholog | many-to-1 | TP6G21820 | 1 | ||
| Theobroma cacao | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TC0009G25770 | 1 | |
| Tree-based ortholog | many-to-1 | TC0009G25770 | 1 | ||
| Vitis vinifera | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV06G04780 | 1 | |
| Tree-based ortholog | many-to-1 | VV06G04780 | 1 | ||
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM10G08330 | 1 | |
| Tree-based ortholog | many-to-1 | ZM10G08330 | 1 |