Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
OS07G41900
(Oryza sativa ssp. japonica)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Oryza sativa ssp. japonica | Orthologous gene family | OS07G41900 | 1 |  |
| Best-Hits-and-Inparalogs(BHI)family | OS07G41900 | 1 | ||
| Tree-based ortholog | OS07G41900 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | 1-to-1 | ATR_00002G05330 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00002G05330 | 1 | ||
| Tree-based ortholog | 1-to-1 | ATR_00002G05330 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | 1-to-1 | AL3G25370 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL3G25370 | 1 | ||
| Tree-based ortholog | 1-to-1 | AL3G25370 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | 1-to-1 | AT3G22990 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT3G22990 | 1 | ||
| Tree-based ortholog | 1-to-1 | AT3G22990 | 1 | ||
| Beta vulgaris | Orthologous gene family | 1-to-1 | BV8G09940 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV8G09940 | 1 | ||
| Tree-based ortholog | 1-to-1 | BV8G09940 | 1 | ||
| Brassica rapa | Orthologous gene family | 1-to-1 | BR05G20650 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR05G20650 | 1 | ||
| Tree-based ortholog | 1-to-1 | BR05G20650 | 1 | ||
| Capsella rubella | Orthologous gene family | 1-to-1 | CRU_003G22200 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_003G22200 | 1 | ||
| Tree-based ortholog | 1-to-1 | CRU_003G22200 | 1 | ||
| Carica papaya | Orthologous gene family | 1-to-1 | CP00058G00030 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00058G00030 | 1 | ||
| Tree-based ortholog | 1-to-1 | CP00058G00030 | 1 | ||
| Chlamydomonas reinhardtii | Tree-based ortholog | 1-to-1 | CR03G13430 | 1 | |
| Citrullus lanatus | Orthologous gene family | 1-to-1 | CL05G05220 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL05G05220 | 1 | ||
| Tree-based ortholog | 1-to-1 | CL05G05220 | 1 | ||
| Citrus sinensis | Orthologous gene family | 1-to-1 | CS00132G00320 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00132G00320 | 1 | ||
| Tree-based ortholog | 1-to-1 | CS00132G00320 | 1 | ||
| Cucumis melo | Orthologous gene family | 1-to-1 | CM00006G05880 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00006G05880 | 1 | ||
| Tree-based ortholog | 1-to-1 | CM00006G05880 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | 1-to-1 | EG0008G25840 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0008G25840 | 1 | ||
| Tree-based ortholog | 1-to-1 | EG0008G25840 | 1 | ||
| Fragaria vesca | Orthologous gene family | 1-to-1 | FV4G06740 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV4G06740 | 1 | ||
| Tree-based ortholog | 1-to-1 | FV4G06740 | 1 | ||
| Glycine max | Orthologous gene family | 1-to-many | GM02G00390 GM10G00450 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM10G00450 GM02G00390 | 2 | ||
| Tree-based ortholog | 1-to-many | GM10G00450 GM02G00390 | 2 | ||
| Gossypium raimondii | Orthologous gene family | 1-to-1 | GR11G16730 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR11G16730 | 1 | ||
| Tree-based ortholog | 1-to-1 | GR11G16730 | 1 | ||
| Malus domestica | Orthologous gene family | 1-to-many | MD00G406960 MD00G410470 MD13G020050 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD13G020050 MD00G410470 | 2 | ||
| Tree-based ortholog | 1-to-many | MD13G020050 MD00G410470 MD00G406960 | 3 | ||
| Manihot esculenta | Orthologous gene family | 1-to-many | ME01551G01540 ME10563G00560 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME10563G00560 ME01551G01540 | 2 | ||
| Tree-based ortholog | 1-to-many | ME10563G00560 ME01551G01540 | 2 | ||
| Medicago truncatula | Orthologous gene family | 1-to-1 | MT1G041115 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT1G041115 | 1 | ||
| Tree-based ortholog | 1-to-1 | MT1G041115 | 1 | ||
| Physcomitrella patens | Orthologous gene family | 1-to-many | PP00090G00140 PP00211G00560 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00211G00560 PP00090G00140 | 2 | ||
| Tree-based ortholog | 1-to-many | PP00090G00140 PP00211G00560 | 2 | ||
| Populus trichocarpa | Orthologous gene family | 1-to-1 | PT08G15990 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT08G15990 | 1 | ||
| Tree-based ortholog | 1-to-1 | PT08G15990 | 1 | ||
| Prunus persica | Orthologous gene family | 1-to-1 | PPE_001G02510 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_001G02510 | 1 | ||
| Tree-based ortholog | 1-to-1 | PPE_001G02510 | 1 | ||
| Ricinus communis | Orthologous gene family | 1-to-1 | RC29844G00350 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29844G00350 | 1 | ||
| Tree-based ortholog | 1-to-1 | RC29844G00350 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | 1-to-many | SL03G005310 SL09G083000 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL09G083000 | 1 | ||
| Tree-based ortholog | 1-to-many | SL03G005310 SL09G083000 | 2 | ||
| Solanum tuberosum | Orthologous gene family | 1-to-many | ST03G005530 ST09G024890 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST09G024890 | 1 | ||
| Tree-based ortholog | 1-to-many | ST03G005530 ST09G024890 | 2 | ||
| Thellungiella parvula | Orthologous gene family | 1-to-1 | TP3G20680 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP3G20680 | 1 | ||
| Tree-based ortholog | 1-to-1 | TP3G20680 | 1 | ||
| Theobroma cacao | Orthologous gene family | 1-to-1 | TC0004G24510 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0004G24510 | 1 | ||
| Tree-based ortholog | 1-to-1 | TC0004G24510 | 1 | ||
| Vitis vinifera | Orthologous gene family | 1-to-1 | VV05G05750 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV05G05750 | 1 | ||
| Tree-based ortholog | 1-to-1 | VV05G05750 | 1 | ||
| Zea mays | Orthologous gene family | 1-to-1 | ZM04G17610 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM04G17610 | 1 | ||
| Tree-based ortholog | 1-to-1 | ZM04G17610 | 1 |