Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
OS03G04490
(Oryza sativa ssp. japonica)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Oryza sativa ssp. japonica | Orthologous gene family | OS03G04490 | 1 |  |
| Anchor point | OS10G33310 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | OS03G04490 | 1 | ||
| Tree-based ortholog | OS03G04490 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Anchor point | 1-to-1 | ATR_00067G01720 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ATR_00067G01720 ATR_01954G00010 | 2 | ||
| Tree-based ortholog | 1-to-many | ATR_00067G01720 ATR_01954G00010 | 2 | ||
| Arabidopsis lyrata | Orthologous gene family | 1-to-1 | AL8G11990 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL8G11990 | 1 | ||
| Tree-based ortholog | 1-to-1 | AL4G17800 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | 1-to-1 | AT5G48820 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT5G48820 | 1 | ||
| Tree-based ortholog | 1-to-1 | AT2G32710 | 1 | ||
| Beta vulgaris | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV7G14680 | 1 | |
| Tree-based ortholog | 1-to-1 | BV0G03660 | 1 | ||
| Brassica rapa | Orthologous gene family | 1-to-many | BR06G30970 BR09G04730 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR05G11500 | 1 | ||
| Tree-based ortholog | 1-to-many | BR04G19460 BR03G16300 BR05G11500 | 3 | ||
| Capsella rubella | Orthologous gene family | 1-to-1 | CRU_008G08440 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_008G08440 | 1 | ||
| Tree-based ortholog | 1-to-1 | CRU_004G13620 | 1 | ||
| Carica papaya | Orthologous gene family | 1-to-1 | CP00008G01520 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00494G00040 | 1 | ||
| Tree-based ortholog | 1-to-1 | CP00494G00040 | 1 | ||
| Citrullus lanatus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL06G07570 | 1 | |
| Tree-based ortholog | 1-to-many | CL06G07570 CL05G03680 | 2 | ||
| Citrus sinensis | Orthologous gene family | 1-to-1 | CS00029G00570 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00055G00100 | 1 | ||
| Tree-based ortholog | 1-to-1 | CS00055G00100 | 1 | ||
| Cucumis melo | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00043G01220 | 1 | |
| Tree-based ortholog | 1-to-many | CM00043G01220 CM00006G04110 | 2 | ||
| Eucalyptus grandis | Orthologous gene family | 1-to-1 | EG0011G17910 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0008G00620 | 1 | ||
| Tree-based ortholog | 1-to-1 | EG0008G00620 | 1 | ||
| Fragaria vesca | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV4G07920 | 1 | |
| Tree-based ortholog | 1-to-1 | FV4G07920 | 1 | ||
| Glycine max | Orthologous gene family | 1-to-many | GM08G46890 GM18G36820 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM08G46890 GM18G36820 | 2 | ||
| Tree-based ortholog | 1-to-1 | GM20G34090 | 1 | ||
| Gossypium raimondii | Orthologous gene family | 1-to-1 | GR04G22550 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GR06G22190 GR06G22180 | 2 | ||
| Tree-based ortholog | 1-to-many | GR06G22180 GR06G22190 GR09G33920 | 3 | ||
| Lotus japonicus | Orthologous gene family | 1-to-1 | LJ2G024050 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ2G024050 | 1 | ||
| Tree-based ortholog | 1-to-1 | LJ4G012370 | 1 | ||
| Malus domestica | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD09G015140 | 1 | |
| Tree-based ortholog | 1-to-many | MD00G292240 MD09G015140 | 2 | ||
| Manihot esculenta | Orthologous gene family | 1-to-1 | ME08287G00150 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME02421G00440 ME03332G01420 | 2 | ||
| Tree-based ortholog | 1-to-many | ME03332G01420 ME02421G00440 | 2 | ||
| Medicago truncatula | Orthologous gene family | 1-to-many | MT7G057920 MT7G058390 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MT7G058390 MT7G057920 | 2 | ||
| Tree-based ortholog | 1-to-1 | MT1G072860 | 1 | ||
| Populus trichocarpa | Orthologous gene family | 1-to-1 | PT02G24210 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT02G24210 | 1 | ||
| Tree-based ortholog | 1-to-many | PT01G31400 PT17G05400 | 2 | ||
| Prunus persica | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_001G00600 | 1 | |
| Tree-based ortholog | 1-to-1 | PPE_001G00600 | 1 | ||
| Ricinus communis | Orthologous gene family | 1-to-1 | RC30204G00340 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29904G00720 | 1 | ||
| Tree-based ortholog | 1-to-1 | RC29904G00720 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | 1-to-1 | SL09G061280 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL12G098310 | 1 | ||
| Tree-based ortholog | 1-to-many | SL09G091780 SL12G098310 | 2 | ||
| Solanum tuberosum | Orthologous gene family | 1-to-1 | ST09G017820 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST09G017820 | 1 | ||
| Tree-based ortholog | 1-to-many | ST09G028290 ST12G030040 | 2 | ||
| Thellungiella parvula | Orthologous gene family | 1-to-1 | TP2G19210 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP4G15050 | 1 | ||
| Tree-based ortholog | 1-to-1 | TP4G15050 | 1 | ||
| Theobroma cacao | Orthologous gene family | 1-to-1 | TC0001G22140 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0004G20990 | 1 | ||
| Tree-based ortholog | 1-to-1 | TC0004G20990 | 1 | ||
| Vitis vinifera | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV07G12880 | 1 | |
| Tree-based ortholog | 1-to-1 | VV05G07510 | 1 | ||
| Zea mays | Anchor point | 1-to-many | ZM09G28210 ZM05G10250 ZM01G02910 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM01G02910 ZM09G28210 | 2 | ||
| Tree-based ortholog | 1-to-many | ZM01G02910 ZM09G28210 | 2 |