Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
OS01G60650
(Oryza sativa ssp. japonica)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Oryza sativa ssp. japonica | Orthologous gene family | OS01G60650 | 1 |  |
| Best-Hits-and-Inparalogs(BHI)family | OS01G60650 | 1 | ||
| Tree-based ortholog | OS01G60650 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | 1-to-1 | ATR_00077G00750 | 1 | |
| Anchor point | N/A | ATR_00077G00750 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00077G00750 | 1 | ||
| Tree-based ortholog | 1-to-1 | ATR_00077G00750 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | 1-to-1 | AL4G24930 | 1 | |
| Anchor point | N/A | AL4G24930 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL4G24930 | 1 | ||
| Tree-based ortholog | 1-to-1 | AL4G24930 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | 1-to-1 | AT2G38550 | 1 | |
| Anchor point | N/A | AT2G38550 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT2G38550 | 1 | ||
| Tree-based ortholog | 1-to-1 | AT2G38550 | 1 | ||
| Beta vulgaris | Orthologous gene family | 1-to-1 | BV7G09660 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV7G09660 | 1 | ||
| Tree-based ortholog | 1-to-1 | BV7G09660 | 1 | ||
| Brassica rapa | Orthologous gene family | 1-to-1 | BR05G06850 | 1 | |
| Anchor point | N/A | BR05G06850 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR05G06850 | 1 | ||
| Tree-based ortholog | 1-to-1 | BR05G06850 | 1 | ||
| Capsella rubella | Orthologous gene family | 1-to-1 | CRU_004G19890 | 1 | |
| Anchor point | N/A | CRU_004G19890 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_004G19890 | 1 | ||
| Tree-based ortholog | 1-to-1 | CRU_004G19890 | 1 | ||
| Carica papaya | Orthologous gene family | 1-to-1 | CP00000G00920 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00000G00920 | 1 | ||
| Tree-based ortholog | 1-to-1 | CP00000G00920 | 1 | ||
| Citrullus lanatus | Orthologous gene family | 1-to-1 | CL04G06340 | 1 | |
| Anchor point | N/A | CL04G06340 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL04G06340 | 1 | ||
| Tree-based ortholog | 1-to-1 | CL04G06340 | 1 | ||
| Citrus sinensis | Orthologous gene family | 1-to-1 | CS11986G00010 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS11986G00010 | 1 | ||
| Tree-based ortholog | 1-to-1 | CS11986G00010 | 1 | ||
| Cucumis melo | Orthologous gene family | 1-to-1 | CM00076G00210 | 1 | |
| Anchor point | N/A | CM00076G00210 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00076G00210 | 1 | ||
| Tree-based ortholog | 1-to-1 | CM00076G00210 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | 1-to-1 | EG0011G10710 | 1 | |
| Anchor point | N/A | EG0011G10710 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0011G10710 | 1 | ||
| Tree-based ortholog | 1-to-1 | EG0011G10710 | 1 | ||
| Fragaria vesca | Orthologous gene family | 1-to-1 | FV6G08610 | 1 | |
| Anchor point | N/A | FV6G08610 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV6G08610 | 1 | ||
| Tree-based ortholog | 1-to-1 | FV6G08610 | 1 | ||
| Glycine max | Orthologous gene family | 1-to-many | GM09G41100 GM18G44591 | 2 | |
| Anchor point | N/A | GM09G41100 GM18G44591 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM18G44591 GM09G41100 | 2 | ||
| Tree-based ortholog | 1-to-many | GM18G44591 GM09G41100 GM07G14780 | 3 | ||
| Gossypium raimondii | Orthologous gene family | 1-to-many | GR05G00400 GR11G12690 | 2 | |
| Anchor point | N/A | GR05G00400 GR11G12690 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR11G12690 | 1 | ||
| Tree-based ortholog | 1-to-many | GR05G00400 GR11G12690 | 2 | ||
| Lotus japonicus | Orthologous gene family | 1-to-1 | LJ1G032310 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ1G032310 | 1 | ||
| Tree-based ortholog | 1-to-1 | LJ1G032310 | 1 | ||
| Malus domestica | Orthologous gene family | 1-to-1 | MD12G019610 | 1 | |
| Anchor point | N/A | MD12G019610 MD04G014110 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD12G019610 | 1 | ||
| Tree-based ortholog | 1-to-many | MD12G019610 MD04G014110 | 2 | ||
| Manihot esculenta | Orthologous gene family | 1-to-many | ME03614G00090 ME09360G00300 | 2 | |
| Anchor point | N/A | ME03614G00090 ME09360G00300 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME09360G00300 ME03614G00090 | 2 | ||
| Tree-based ortholog | 1-to-many | ME03614G00090 ME09360G00300 | 2 | ||
| Medicago truncatula | Orthologous gene family | 1-to-1 | MT7G073340 | 1 | |
| Anchor point | N/A | MT7G073340 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT7G073340 | 1 | ||
| Tree-based ortholog | 1-to-1 | MT7G073340 | 1 | ||
| Physcomitrella patens | Orthologous gene family | 1-to-1 | PP00020G01570 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00085G00450 PP00020G01570 PP00185G00360 | 3 | ||
| Tree-based ortholog | 1-to-many | PP00185G00360 PP00085G00450 PP00020G01570 | 3 | ||
| Populus trichocarpa | Orthologous gene family | 1-to-many | PT06G10870 PT16G13720 | 2 | |
| Anchor point | N/A | PT16G13720 PT06G10870 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT16G13720 PT06G10870 | 2 | ||
| Tree-based ortholog | 1-to-many | PT06G10870 PT16G13720 | 2 | ||
| Prunus persica | Orthologous gene family | 1-to-1 | PPE_006G30030 | 1 | |
| Anchor point | N/A | PPE_006G30030 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_006G30030 | 1 | ||
| Tree-based ortholog | 1-to-1 | PPE_006G30030 | 1 | ||
| Ricinus communis | Orthologous gene family | 1-to-1 | RC29915G00110 | 1 | |
| Anchor point | N/A | RC29915G00110 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29915G00110 | 1 | ||
| Tree-based ortholog | 1-to-1 | RC29915G00110 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | 1-to-1 | SL09G015650 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL09G015650 | 1 | ||
| Tree-based ortholog | 1-to-1 | SL09G015650 | 1 | ||
| Solanum tuberosum | Orthologous gene family | 1-to-1 | ST09G014370 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST09G014370 | 1 | ||
| Tree-based ortholog | 1-to-1 | ST09G014370 | 1 | ||
| Thellungiella parvula | Orthologous gene family | 1-to-1 | TP4G20880 | 1 | |
| Anchor point | N/A | TP4G20880 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP4G20880 | 1 | ||
| Tree-based ortholog | 1-to-1 | TP4G20880 | 1 | ||
| Theobroma cacao | Orthologous gene family | 1-to-1 | TC0004G15640 | 1 | |
| Anchor point | N/A | TC0004G15640 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0004G15640 | 1 | ||
| Tree-based ortholog | 1-to-1 | TC0004G15640 | 1 | ||
| Vitis vinifera | Orthologous gene family | 1-to-1 | VV08G05790 | 1 | |
| Anchor point | N/A | VV08G05790 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV08G05790 | 1 | ||
| Tree-based ortholog | 1-to-1 | VV08G05790 | 1 | ||
| Zea mays | Orthologous gene family | 1-to-many | ZM03G28370 ZM08G32840 | 2 | |
| Anchor point | N/A | ZM03G28370 ZM08G32840 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM03G28370 ZM08G32840 | 2 | ||
| Tree-based ortholog | 1-to-many | ZM08G32840 ZM03G28370 | 2 |