Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
MD03G008560
(Malus domestica)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Malus domestica | Orthologous gene family | MD03G008560 | 1 |  |
| Anchor point | MD11G010290 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | MD11G010290 MD03G008560 | 2 | ||
| Tree-based ortholog | MD00G402580 MD00G285470 MD03G008560 | 3 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Anchor point | 1-to-1 | ATR_00175G00120 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ATR_00175G00120 | 1 | ||
| Tree-based ortholog | many-to-1 | ATR_00175G00120 | 1 | ||
| Arabidopsis lyrata | Anchor point | 1-to-1 | AL8G26680 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AL8G26680 | 1 | ||
| Tree-based ortholog | many-to-1 | AL8G26680 | 1 | ||
| Arabidopsis thaliana | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT5G60540 | 1 | |
| Tree-based ortholog | many-to-1 | AT5G60540 | 1 | ||
| Beta vulgaris | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BV9G12040 | 1 | |
| Tree-based ortholog | many-to-1 | BV9G12040 | 1 | ||
| Brassica rapa | Anchor point | 1-to-1 | BR10G13100 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BR10G13100 | 1 | ||
| Tree-based ortholog | many-to-1 | BR10G13100 | 1 | ||
| Capsella rubella | Anchor point | 1-to-1 | CRU_008G20620 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRU_008G20620 | 1 | ||
| Tree-based ortholog | many-to-1 | CRU_008G20620 | 1 | ||
| Carica papaya | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00216G00160 | 1 | |
| Tree-based ortholog | many-to-many | CP00216G00170 CP00216G00160 | 2 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR03G05700 | 1 | |
| Tree-based ortholog | many-to-1 | CR03G05700 | 1 | ||
| Citrullus lanatus | Anchor point | 1-to-1 | CL02G21210 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL02G21210 | 1 | ||
| Tree-based ortholog | many-to-1 | CL02G21210 | 1 | ||
| Citrus sinensis | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS00014G02080 | 1 | |
| Tree-based ortholog | many-to-1 | CS00014G02080 | 1 | ||
| Cucumis melo | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00082G00910 | 1 | |
| Tree-based ortholog | many-to-1 | CM00082G00910 | 1 | ||
| Eucalyptus grandis | Anchor point | 1-to-1 | EG0002G20050 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | EG0002G20050 | 1 | ||
| Tree-based ortholog | many-to-1 | EG0002G20050 | 1 | ||
| Fragaria vesca | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FV3G37700 | 1 | |
| Tree-based ortholog | many-to-1 | FV3G37700 | 1 | ||
| Glycine max | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GM03G08260 | 1 | |
| Tree-based ortholog | many-to-many | GM03G08260 GM01G27765 GM01G28830 | 3 | ||
| Gossypium raimondii | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GR09G07830 | 1 | |
| Tree-based ortholog | many-to-1 | GR09G07830 | 1 | ||
| Manihot esculenta | Anchor point | 1-to-1 | ME06327G00220 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ME06327G00220 | 1 | ||
| Tree-based ortholog | many-to-1 | ME06327G00220 | 1 | ||
| Medicago truncatula | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MT4G015590 | 1 | |
| Tree-based ortholog | many-to-1 | MT4G015590 | 1 | ||
| Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS02G03740 | 1 | |
| Tree-based ortholog | many-to-1 | OS02G03740 | 1 | ||
| Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL16G02600 | 1 | |
| Tree-based ortholog | many-to-1 | OL16G02600 | 1 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00033G01010 PP00303G00450 | 2 | |
| Tree-based ortholog | many-to-many | PP00303G00450 PP00033G01010 | 2 | ||
| Populus trichocarpa | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PT09G01270 | 1 | |
| Tree-based ortholog | many-to-1 | PT09G01270 | 1 | ||
| Prunus persica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPE_006G09870 | 1 | |
| Tree-based ortholog | many-to-1 | PPE_006G09870 | 1 | ||
| Ricinus communis | Anchor point | 1-to-1 | RC28076G00150 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC28076G00150 | 1 | ||
| Tree-based ortholog | many-to-1 | RC28076G00150 | 1 | ||
| Solanum lycopersicum | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL11G069290 | 1 | |
| Tree-based ortholog | many-to-1 | SL11G069290 | 1 | ||
| Solanum tuberosum | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST11G026130 | 1 | |
| Tree-based ortholog | many-to-1 | ST11G026130 | 1 | ||
| Thellungiella parvula | Anchor point | 1-to-1 | TP6G22110 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP6G22110 | 1 | ||
| Tree-based ortholog | many-to-1 | TP6G22110 | 1 | ||
| Theobroma cacao | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TC0009G25310 | 1 | |
| Tree-based ortholog | many-to-1 | TC0009G25310 | 1 | ||
| Vitis vinifera | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV06G05240 | 1 | |
| Tree-based ortholog | many-to-1 | VV06G05240 | 1 | ||
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM04G40870 | 1 | |
| Tree-based ortholog | many-to-1 | ZM04G40870 | 1 |