Integrative Orthology Viewer: MD00G207840 (Malus domestica)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Malus domestica | Orthologous gene family | MD00G031450 MD00G170730 MD00G175910 ... | 5 | |
Best-Hits-and-Inparalogs(BHI)family | MD00G207840 | 1 | ||
Tree-based ortholog | MD00G207840 MD14G017050 | 2 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00029G03780 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00029G03780 | 1 | ||
Tree-based ortholog | many-to-many | ATR_00029G03760 ATR_00029G03670 | 2 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-many | AL4G14250 AL5G26080 AL6G05340 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL6G05340 | 1 | ||
Tree-based ortholog | many-to-many | AL6G05350 AL1G06860 | 2 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT2G29690 AT3G55870 AT5G05730 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT5G05730 | 1 | ||
Tree-based ortholog | many-to-many | AT5G05740 AT2G29680 AT1G07270 | 3 | ||
Beta vulgaris | Orthologous gene family | many-to-many | BV7G05190 BV7G05210 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV7G05210 | 1 | ||
Tree-based ortholog | many-to-1 | BV7G05210 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR03G02070 BR10G23960 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR10G23960 | 1 | ||
Tree-based ortholog | many-to-many | BR03G02080 BR05G13800 BR10G00830 | 3 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_005G21330 CRU_006G04490 CRU_006G04520 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_006G04490 | 1 | ||
Tree-based ortholog | many-to-many | CRU_006G04530 CRU_004G10490 CRU_001G06190 | 3 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP00019G01920 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00019G01920 | 1 | ||
Tree-based ortholog | many-to-many | CP00019G01930 CP00112G00410 | 2 | ||
Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR06G14820 | 1 | |
Tree-based ortholog | many-to-many | CR06G11700 CR03G08880 CR01G10620 | 3 | ||
Citrullus lanatus | Orthologous gene family | many-to-many | CL04G00660 CL04G00680 CL11G01130 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL11G01130 | 1 | ||
Tree-based ortholog | many-to-many | CL04G00660 CL11G01050 CL02G19900 | 3 | ||
Citrus sinensis | Orthologous gene family | many-to-many | CS00021G00790 CS00026G00950 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00021G00790 | 1 | ||
Tree-based ortholog | many-to-many | CS00021G00800 CS00026G00940 CS00021G00790 | 3 | ||
Cucumis melo | Orthologous gene family | many-to-many | CM00008G02410 CM00010G02420 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00010G02420 | 1 | ||
Tree-based ortholog | many-to-many | CM00008G02350 CM00084G00210 | 2 | ||
Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0007G24230 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0007G24230 | 1 | ||
Tree-based ortholog | many-to-many | EG0010G02060 EG0002G18000 | 2 | ||
Fragaria vesca | Orthologous gene family | many-to-1 | FV7G29150 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV7G29150 | 1 | ||
Tree-based ortholog | many-to-1 | FV3G32480 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM10G43210 GM18G03263 GM18G03270 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GM18G03270 | 1 | ||
Tree-based ortholog | many-to-many | GM02G42300 GM14G06590 GM18G03263 ... | 5 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR01G11550 GR09G32220 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR09G32220 | 1 | ||
Tree-based ortholog | many-to-many | GR12G07620 GR03G12350 | 2 | ||
Lotus japonicus | Orthologous gene family | many-to-many | LJ1G073710 LJ5G040360 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ5G040360 | 1 | ||
Tree-based ortholog | many-to-1 | LJ5G040360 | 1 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME03150G00330 ME08265G03110 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME08265G03110 | 1 | ||
Tree-based ortholog | many-to-many | ME08265G03100 ME03150G00350 | 2 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT1G114520 MT3G070290 MT3G076770 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MT3G467000 MT3G076770 MT3G070290 | 3 | ||
Tree-based ortholog | many-to-many | MT5G082260 MT3G463490 | 2 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS03G15780 OS03G61120 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS03G61120 | 1 | ||
Tree-based ortholog | many-to-1 | OS03G15780 | 1 | ||
Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL07G01130 | 1 | |
Tree-based ortholog | many-to-1 | OL04G01040 | 1 | ||
Physcomitrella patens | Orthologous gene family | many-to-many | PP00077G00900 PP00154G00470 PP00154G00780 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00077G00900 PP00154G00780 PP00154G00470 | 3 | ||
Tree-based ortholog | many-to-many | PP00030G00600 PP08410G00010 | 2 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT09G04430 PT10G19060 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT10G19060 | 1 | ||
Tree-based ortholog | many-to-many | PT01G25030 PT10G19070 PT08G06650 ... | 5 | ||
Prunus persica | Orthologous gene family | many-to-1 | PPE_002G23840 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_002G23840 | 1 | ||
Tree-based ortholog | many-to-1 | PPE_002G23840 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-many | RC29669G00390 RC29681G00290 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29669G00390 | 1 | ||
Tree-based ortholog | many-to-many | RC29669G00370 RC29681G00270 RC30927G00010 | 3 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL06G005980 SL06G006100 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL06G006100 | 1 | ||
Tree-based ortholog | many-to-many | SL06G019200 SL06G076860 SL06G005980 | 3 | ||
Solanum tuberosum | Orthologous gene family | many-to-1 | ST06G006020 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST06G006020 | 1 | ||
Tree-based ortholog | many-to-many | ST06G032620 ST06G005900 ST06G005920 | 3 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP4G12410 TP6G37170 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP6G37170 | 1 | ||
Tree-based ortholog | many-to-many | TP6G37160 TP4G12400 | 2 | ||
Theobroma cacao | Orthologous gene family | many-to-many | TC0009G29890 TC0010G02140 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0010G02140 | 1 | ||
Tree-based ortholog | many-to-1 | TC0010G02140 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-many | VV06G02040 VV13G10700 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV13G10700 | 1 | ||
Tree-based ortholog | many-to-many | VV13G10710 VV06G02060 | 2 | ||
Zea mays | Orthologous gene family | many-to-many | ZM01G10660 ZM01G58430 ZM05G01210 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM01G10660 | 1 | ||
Tree-based ortholog | many-to-many | ZM01G58430 ZM03G26500 ZM01G10660 | 3 |