Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
MD00G107940
(Malus domestica)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Malus domestica | Orthologous gene family | MD00G107940 MD03G000750 MD11G000230 | 3 |  |
| Best-Hits-and-Inparalogs(BHI)family | MD00G107940 MD11G000230 MD03G000750 | 3 | ||
| Tree-based ortholog | MD00G107940 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ATR_00089G00480 | 1 | |
| Tree-based ortholog | 1-to-1 | ATR_00010G00390 | 1 | ||
| Arabidopsis lyrata | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AL3G14030 | 1 | |
| Tree-based ortholog | 1-to-1 | AL5G31450 | 1 | ||
| Arabidopsis thaliana | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT3G13490 | 1 | |
| Tree-based ortholog | 1-to-1 | AT3G30805 | 1 | ||
| Beta vulgaris | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BV4G11290 | 1 | |
| Tree-based ortholog | 1-to-1 | BV4G11290 | 1 | ||
| Brassica rapa | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BR05G29460 | 1 | |
| Tree-based ortholog | 1-to-1 | BR05G30920 | 1 | ||
| Capsella rubella | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRU_003G12390 | 1 | |
| Tree-based ortholog | 1-to-1 | CRU_003G12390 | 1 | ||
| Carica papaya | Orthologous gene family | many-to-1 | CP00119G00370 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00119G00370 | 1 | ||
| Tree-based ortholog | 1-to-1 | CP00119G00370 | 1 | ||
| Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR06G12380 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR06G12380 | 1 | ||
| Tree-based ortholog | 1-to-1 | CR06G12380 | 1 | ||
| Citrullus lanatus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL02G24410 | 1 | |
| Tree-based ortholog | 1-to-1 | CL02G24420 | 1 | ||
| Citrus sinensis | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS00123G00210 | 1 | |
| Tree-based ortholog | 1-to-1 | CS00123G00210 | 1 | ||
| Cucumis melo | Orthologous gene family | many-to-1 | CM00022G05580 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00022G05580 | 1 | ||
| Tree-based ortholog | 1-to-1 | CM00022G05580 | 1 | ||
| Eucalyptus grandis | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | EG0010G15270 | 1 | |
| Tree-based ortholog | 1-to-1 | EG0010G15270 | 1 | ||
| Fragaria vesca | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FV3G36010 | 1 | |
| Tree-based ortholog | 1-to-1 | FV3G36010 | 1 | ||
| Glycine max | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GM03G25750 | 1 | |
| Tree-based ortholog | 1-to-1 | GM03G25750 | 1 | ||
| Gossypium raimondii | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GR04G02070 | 1 | |
| Tree-based ortholog | 1-to-1 | GR04G02070 | 1 | ||
| Lotus japonicus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | LJ2G012940 | 1 | |
| Tree-based ortholog | 1-to-1 | LJ2G012940 | 1 | ||
| Manihot esculenta | Orthologous gene family | many-to-1 | ME05161G00070 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ME05161G00060 | 1 | ||
| Tree-based ortholog | 1-to-1 | ME05161G00060 | 1 | ||
| Medicago truncatula | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MT8G007295 | 1 | |
| Tree-based ortholog | 1-to-1 | MT4G127790 | 1 | ||
| Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS02G41470 | 1 | |
| Tree-based ortholog | 1-to-1 | OS02G41470 | 1 | ||
| Ostreococcus lucimarinus | Orthologous gene family | many-to-1 | OL11G00970 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL11G00970 | 1 | ||
| Tree-based ortholog | 1-to-1 | OL11G00970 | 1 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PP00303G00330 | 1 | |
| Tree-based ortholog | 1-to-1 | PP00303G00330 | 1 | ||
| Populus trichocarpa | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PT03G22160 | 1 | |
| Tree-based ortholog | 1-to-1 | PT03G22160 | 1 | ||
| Prunus persica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPE_006G01590 | 1 | |
| Tree-based ortholog | 1-to-1 | PPE_006G01590 | 1 | ||
| Ricinus communis | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC28842G00380 | 1 | |
| Tree-based ortholog | 1-to-1 | RC28842G00380 | 1 | ||
| Solanum lycopersicum | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL01G005540 | 1 | |
| Tree-based ortholog | 1-to-many | SL11G020030 SL06G050400 | 2 | ||
| Solanum tuberosum | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST01G005760 | 1 | |
| Tree-based ortholog | 1-to-many | ST01G005760 ST10G027460 ST10G027450 ... | 4 | ||
| Thellungiella parvula | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP3G11700 | 1 | |
| Tree-based ortholog | 1-to-1 | TP3G11700 | 1 | ||
| Theobroma cacao | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TC0004G05720 | 1 | |
| Tree-based ortholog | 1-to-1 | TC0004G05720 | 1 | ||
| Vitis vinifera | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV06G07670 | 1 | |
| Tree-based ortholog | 1-to-1 | VV00G01370 | 1 | ||
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM01G58870 | 1 | |
| Tree-based ortholog | 1-to-many | ZM04G25940 ZM01G58870 | 2 |