Integrative Orthology Viewer: MD00G000060 (Malus domestica)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Malus domestica | Orthologous gene family | MD00G000060 MD00G064520 MD00G183130 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | MD00G000060 | 1 | ||
Tree-based ortholog | MD00G000060 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-many | ATR_00092G00920 ATR_00203G00050 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00203G00050 | 1 | ||
Tree-based ortholog | 1-to-1 | ATR_00092G00920 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-many | AL2G28660 AL2G28960 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL2G28960 | 1 | ||
Tree-based ortholog | 1-to-many | AL2G28960 AL2G28660 | 2 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT1G15960 AT1G80830 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT1G15960 | 1 | ||
Tree-based ortholog | 1-to-many | AT1G80830 AT1G15960 | 2 | ||
Beta vulgaris | Orthologous gene family | many-to-many | BV5G18930 BV9G18940 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV5G18930 | 1 | ||
Tree-based ortholog | 1-to-1 | BV5G18930 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR02G18570 BR02G25560 BR06G11270 ... | 5 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR06G11270 | 1 | ||
Tree-based ortholog | 1-to-many | BR06G11270 BR02G18570 BR02G25560 ... | 5 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_001G15060 CRU_002G25270 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_001G15060 | 1 | ||
Tree-based ortholog | 1-to-many | CRU_002G25270 CRU_001G15060 | 2 | ||
Carica papaya | Orthologous gene family | many-to-many | CP00010G00730 CP00064G01240 CP00064G01250 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00064G01250 | 1 | ||
Tree-based ortholog | 1-to-many | CP00064G01250 CP00064G01240 | 2 | ||
Chlamydomonas reinhardtii | Orthologous gene family | many-to-many | CR07G02160 CR17G02570 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | CR17G02570 CR07G02160 | 2 | ||
Tree-based ortholog | 1-to-many | CR07G02160 CR17G02570 CR07G00710 | 3 | ||
Citrullus lanatus | Orthologous gene family | many-to-many | CL08G05890 CL10G11140 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL08G05890 | 1 | ||
Tree-based ortholog | 1-to-1 | CL08G05890 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-many | CS00004G00450 CS00733G00020 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00004G00450 | 1 | ||
Tree-based ortholog | 1-to-many | CS00004G00440 CS00004G00450 | 2 | ||
Cucumis melo | Orthologous gene family | many-to-many | CM00050G00340 CM00064G00220 CM00104G00130 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00050G00340 | 1 | ||
Tree-based ortholog | 1-to-1 | CM00050G00340 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-many | EG0006G32600 EG0006G37090 EG0006G37100 ... | 5 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | EG0006G37090 EG0006G37100 EG0941G00020 | 3 | ||
Tree-based ortholog | 1-to-1 | EG0006G32600 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-many | FV2G29980 FV6G24670 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV2G29980 | 1 | ||
Tree-based ortholog | 1-to-1 | FV2G29980 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM06G12190 GM07G02680 GM08G23320 ... | 5 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GM06G12190 | 1 | ||
Tree-based ortholog | 1-to-1 | GM06G12190 | 1 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR09G12420 GR09G24810 GR10G05250 ... | 6 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR09G24810 | 1 | ||
Tree-based ortholog | 1-to-many | GR10G21740 GR10G21770 GR10G05250 ... | 4 | ||
Lotus japonicus | Orthologous gene family | many-to-many | LJ1G012090 LJ4G027800 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ4G027800 | 1 | ||
Tree-based ortholog | 1-to-many | LJ1G012090 LJ4G027800 | 2 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME04314G00010 ME09305G00020 ME09305G00030 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME04314G00010 | 1 | ||
Tree-based ortholog | 1-to-many | ME04314G00010 ME10727G00020 | 2 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT2G104990 MT3G088440 MT3G088460 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT3G088440 | 1 | ||
Tree-based ortholog | 1-to-many | MT3G088460 MT4G094602 MT3G088440 | 3 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS01G31870 OS02G03900 OS06G46310 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS07G15370 | 1 | ||
Tree-based ortholog | 1-to-many | OS07G15460 OS07G15370 OS01G31870 ... | 5 | ||
Ostreococcus lucimarinus | Orthologous gene family | many-to-1 | OL14G01190 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL14G01190 | 1 | ||
Tree-based ortholog | 1-to-1 | OL14G01190 | 1 | ||
Physcomitrella patens | Orthologous gene family | many-to-many | PP00037G00200 PP00074G01440 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00001G00340 PP00139G00410 PP00002G01740 | 3 | ||
Tree-based ortholog | 1-to-many | PP00074G01440 PP00037G00200 PP00054G00800 ... | 4 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT01G04490 PT02G08040 PT02G08050 ... | 5 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT05G18100 PT02G08040 PT05G18110 | 3 | ||
Tree-based ortholog | 1-to-many | PT05G18100 PT05G18110 PT02G08040 ... | 4 | ||
Prunus persica | Orthologous gene family | many-to-many | PPE_001G49730 PPE_003G08520 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_001G49730 | 1 | ||
Tree-based ortholog | 1-to-1 | PPE_001G49730 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-many | RC29588G00070 RC29648G00900 RC29648G00910 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29648G00910 | 1 | ||
Tree-based ortholog | 1-to-many | RC29648G00900 RC29648G00910 | 2 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL03G116900 SL11G018530 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL11G018530 | 1 | ||
Tree-based ortholog | 1-to-1 | SL11G018530 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST03G030350 ST11G013300 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST11G013300 | 1 | ||
Tree-based ortholog | 1-to-1 | ST11G013300 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP1G14270 TP5G34930 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP1G14270 | 1 | ||
Tree-based ortholog | 1-to-many | TP1G14270 TP5G34930 | 2 | ||
Theobroma cacao | Orthologous gene family | many-to-many | TC0006G03960 TC0008G12570 TC0008G12610 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | TC0008G12610 TC0008G12570 | 2 | ||
Tree-based ortholog | 1-to-many | TC0008G12610 TC0008G12570 | 2 | ||
Vitis vinifera | Orthologous gene family | many-to-many | VV00G08280 VV09G10350 VV18G01790 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV18G01790 | 1 | ||
Tree-based ortholog | 1-to-many | VV18G01810 VV18G01790 VV18G01800 | 3 | ||
Zea mays | Orthologous gene family | many-to-many | ZM02G28580 ZM05G12690 ZM07G05920 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM07G05920 | 1 | ||
Tree-based ortholog | 1-to-many | ZM08G07920 ZM02G28580 ZM07G05920 ... | 6 |