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Integrative Orthology Viewer:
LJ2G008640
(Lotus japonicus)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Lotus japonicus | Orthologous gene family | LJ1G001030 LJ1G033560 LJ2G008640 ... | 6 |  |
| Best-Hits-and-Inparalogs(BHI)family | LJ2G008640 | 1 | ||
| Tree-based ortholog | LJ2G008640 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | many-to-many | ATR_00004G02640 ATR_00024G00470 ATR_00048G00420 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00024G00470 | 1 | ||
| Tree-based ortholog | 1-to-1 | ATR_00109G00560 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | many-to-1 | AL5G31790 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL5G31790 | 1 | ||
| Tree-based ortholog | 1-to-1 | AL5G31790 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | many-to-many | AT1G05230 AT1G17920 AT1G34650 ... | 15 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT1G73360 | 1 | ||
| Tree-based ortholog | 1-to-many | AT1G17920 AT1G73360 | 2 | ||
| Beta vulgaris | Orthologous gene family | many-to-many | BV0G14410 BV0G31130 BV1G07640 ... | 5 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV1G07640 | 1 | ||
| Tree-based ortholog | 1-to-1 | BV9G16940 | 1 | ||
| Brassica rapa | Orthologous gene family | many-to-many | BR01G12010 BR01G27310 BR01G35940 ... | 27 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR07G29220 | 1 | ||
| Tree-based ortholog | 1-to-many | BR08G26260 BR06G12780 BR07G20870 ... | 4 | ||
| Capsella rubella | Orthologous gene family | many-to-many | CRU_001G04170 CRU_001G16850 CRU_001G31090 ... | 16 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_002G18950 | 1 | ||
| Tree-based ortholog | 1-to-many | CRU_001G16850 CRU_002G18950 | 2 | ||
| Carica papaya | Orthologous gene family | many-to-many | CP00007G01380 CP00008G02160 CP00018G02090 ... | 9 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00007G01380 | 1 | ||
| Tree-based ortholog | 1-to-1 | CP00007G01380 | 1 | ||
| Citrullus lanatus | Orthologous gene family | many-to-many | CL01G22220 CL02G00290 CL02G08740 ... | 12 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL04G12490 | 1 | ||
| Tree-based ortholog | 1-to-1 | CL04G12490 | 1 | ||
| Citrus sinensis | Orthologous gene family | many-to-many | CS00001G02540 CS00010G01380 CS00062G00370 ... | 8 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00340G00020 | 1 | ||
| Tree-based ortholog | 1-to-1 | CS00340G00020 | 1 | ||
| Cucumis melo | Orthologous gene family | many-to-many | CM00001G00290 CM00001G05820 CM00006G10030 ... | 10 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00001G00290 | 1 | ||
| Tree-based ortholog | 1-to-1 | CM00001G00290 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-many | EG0001G14050 EG0003G24610 EG0004G18290 ... | 10 | |
| Anchor point | N/A | EG0008G05250 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0008G05250 | 1 | ||
| Tree-based ortholog | 1-to-1 | EG0008G05250 | 1 | ||
| Fragaria vesca | Orthologous gene family | many-to-many | FV0G29870 FV1G16290 FV1G16400 ... | 9 | |
| Anchor point | N/A | FV5G15790 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV5G15790 | 1 | ||
| Tree-based ortholog | 1-to-1 | FV5G15790 | 1 | ||
| Glycine max | Orthologous gene family | many-to-many | GM01G01850 GM01G45070 GM03G01860 ... | 29 | |
| Anchor point | N/A | GM16G34350 GM09G29810 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM16G34350 GM09G29810 | 2 | ||
| Tree-based ortholog | 1-to-many | GM08G06190 GM05G33520 GM09G29810 ... | 4 | ||
| Gossypium raimondii | Orthologous gene family | many-to-many | GR01G17100 GR03G18490 GR03G18500 ... | 14 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR08G29330 | 1 | ||
| Tree-based ortholog | 1-to-1 | GR08G29330 | 1 | ||
| Malus domestica | Orthologous gene family | many-to-many | MD00G113710 MD00G159360 MD00G230300 ... | 22 | |
| Anchor point | N/A | MD09G025780 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD00G359640 MD06G020360 | 2 | ||
| Tree-based ortholog | 1-to-many | MD06G020360 MD00G359640 | 2 | ||
| Manihot esculenta | Orthologous gene family | many-to-many | ME00341G01100 ME03942G00540 ME04133G00040 ... | 12 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME06792G00040 | 1 | ||
| Tree-based ortholog | 1-to-1 | ME06792G00040 | 1 | ||
| Medicago truncatula | Orthologous gene family | many-to-many | MT00G12020 MT1G101280 MT2G030570 ... | 15 | |
| Anchor point | N/A | MT6G477820 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT6G477820 | 1 | ||
| Tree-based ortholog | 1-to-1 | MT6G477820 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS01G55549 OS02G45250 OS04G48070 ... | 9 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS06G10600 | 1 | ||
| Tree-based ortholog | 1-to-1 | OS06G10600 | 1 | ||
| Physcomitrella patens | Orthologous gene family | many-to-many | PP00059G00720 PP00084G01160 PP00173G00480 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00084G01160 PP00209G00060 PP00059G00720 ... | 4 | ||
| Tree-based ortholog | 1-to-many | PP00209G00060 PP00173G00480 PP00084G01160 ... | 4 | ||
| Populus trichocarpa | Orthologous gene family | many-to-many | PT00G04540 PT01G13780 PT01G18410 ... | 17 | |
| Anchor point | N/A | PT12G03850 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT15G03410 PT12G03850 | 2 | ||
| Tree-based ortholog | 1-to-many | PT15G03410 PT12G03850 | 2 | ||
| Prunus persica | Orthologous gene family | many-to-many | PPE_002G15480 PPE_002G27880 PPE_003G00260 ... | 8 | |
| Anchor point | N/A | PPE_005G24170 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_003G00260 | 1 | ||
| Tree-based ortholog | 1-to-1 | PPE_005G24170 | 1 | ||
| Ricinus communis | Orthologous gene family | many-to-many | RC29600G00040 RC29842G01280 RC30068G01320 ... | 8 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30135G00010 | 1 | ||
| Tree-based ortholog | 1-to-1 | RC30135G00010 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-many | SL01G091630 SL02G080260 SL03G026070 ... | 28 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL06G072310 | 1 | ||
| Tree-based ortholog | 1-to-1 | SL06G072310 | 1 | ||
| Solanum tuberosum | Orthologous gene family | many-to-many | ST01G030790 ST02G023450 ST03G008270 ... | 25 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST06G028670 | 1 | ||
| Tree-based ortholog | 1-to-many | ST06G028670 ST03G022860 | 2 | ||
| Thellungiella parvula | Orthologous gene family | many-to-many | TP1G04080 TP1G15990 TP2G11680 ... | 15 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP5G28290 | 1 | ||
| Tree-based ortholog | 1-to-many | TP1G15990 TP5G28290 | 2 | ||
| Theobroma cacao | Orthologous gene family | many-to-many | TC0001G36320 TC0002G31280 TC0003G17380 ... | 8 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0010G14540 | 1 | ||
| Tree-based ortholog | 1-to-1 | TC0010G14540 | 1 | ||
| Vitis vinifera | Orthologous gene family | many-to-many | VV02G01740 VV04G07090 VV09G05000 ... | 8 | |
| Anchor point | N/A | VV17G09890 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV17G09890 | 1 | ||
| Tree-based ortholog | 1-to-1 | VV17G09890 | 1 | ||
| Zea mays | Orthologous gene family | many-to-many | ZM01G22370 ZM02G03810 ZM03G06790 ... | 13 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM04G26790 ZM05G41990 | 2 | ||
| Tree-based ortholog | 1-to-many | ZM04G26790 ZM05G41990 ZM06G15760 ... | 4 |