Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
LJ1G002410
(Lotus japonicus)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Lotus japonicus | Orthologous gene family | LJ1G002410 | 1 |  |
| Best-Hits-and-Inparalogs(BHI)family | LJ1G002410 | 1 | ||
| Tree-based ortholog | LJ1G022530 LJ1G002410 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00135G00070 | 1 | |
| Tree-based ortholog | many-to-1 | ATR_00135G00070 | 1 | ||
| Arabidopsis lyrata | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL2G07460 | 1 | |
| Tree-based ortholog | many-to-1 | AL2G07460 | 1 | ||
| Arabidopsis thaliana | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT1G58120 | 1 | |
| Tree-based ortholog | many-to-1 | AT1G58120 | 1 | ||
| Beta vulgaris | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV1G09800 | 1 | |
| Tree-based ortholog | many-to-1 | BV1G09800 | 1 | ||
| Brassica rapa | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR09G15490 | 1 | |
| Tree-based ortholog | many-to-many | BR09G15490 BR01G24510 | 2 | ||
| Capsella rubella | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_002G06170 | 1 | |
| Tree-based ortholog | many-to-1 | CRU_002G06170 | 1 | ||
| Carica papaya | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP34898G00010 | 1 | |
| Tree-based ortholog | many-to-1 | CP34898G00010 | 1 | ||
| Citrullus lanatus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL11G08670 | 1 | |
| Tree-based ortholog | many-to-1 | CL11G08670 | 1 | ||
| Citrus sinensis | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00004G02870 | 1 | |
| Tree-based ortholog | many-to-1 | CS00004G02870 | 1 | ||
| Cucumis melo | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM01596G02450 | 1 | |
| Tree-based ortholog | many-to-1 | CM01596G02450 | 1 | ||
| Eucalyptus grandis | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0009G22150 | 1 | |
| Tree-based ortholog | many-to-1 | EG0006G03560 | 1 | ||
| Fragaria vesca | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV5G21010 | 1 | |
| Tree-based ortholog | many-to-1 | FV5G21010 | 1 | ||
| Glycine max | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM02G37630 GM14G35902 | 2 | |
| Tree-based ortholog | many-to-many | GM06G09836 GM04G09750 GM14G35902 ... | 4 | ||
| Gossypium raimondii | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR09G27940 | 1 | |
| Tree-based ortholog | many-to-many | GR05G09630 GR09G27940 GR05G09620 | 3 | ||
| Malus domestica | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD00G198230 | 1 | |
| Tree-based ortholog | many-to-many | MD09G021740 MD00G198230 | 2 | ||
| Manihot esculenta | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME01624G00200 | 1 | |
| Tree-based ortholog | many-to-1 | ME01624G00200 | 1 | ||
| Medicago truncatula | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT5G065970 | 1 | |
| Tree-based ortholog | many-to-many | MT3G100550 MT5G065970 | 2 | ||
| Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | OS02G52300 OS02G52305 | 2 | |
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00140G00110 | 1 | |
| Populus trichocarpa | Anchor point | N/A | PT02G10450 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT02G10450 | 1 | ||
| Tree-based ortholog | many-to-1 | PT02G10450 | 1 | ||
| Prunus persica | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_001G58580 | 1 | |
| Tree-based ortholog | many-to-1 | PPE_001G58580 | 1 | ||
| Ricinus communis | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29908G02850 | 1 | |
| Tree-based ortholog | many-to-1 | RC29908G02850 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | 1-to-1 | SL04G076150 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL04G076150 | 1 | ||
| Tree-based ortholog | many-to-many | SL12G087930 SL04G076150 | 2 | ||
| Solanum tuberosum | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST04G029490 | 1 | |
| Tree-based ortholog | many-to-many | ST12G026010 ST04G029490 | 2 | ||
| Thellungiella parvula | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP2G05450 | 1 | |
| Tree-based ortholog | many-to-1 | TP2G05450 | 1 | ||
| Theobroma cacao | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0008G06690 | 1 | |
| Tree-based ortholog | many-to-1 | TC0008G06690 | 1 | ||
| Vitis vinifera | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV18G04420 | 1 | |
| Tree-based ortholog | many-to-1 | VV18G04420 | 1 | ||
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM02G41330 ZM07G30810 ZM05G28520 | 3 | |