Integrative Orthology Viewer: GR12G02880 (Gossypium raimondii)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Gossypium raimondii | Orthologous gene family | GR12G02880 | 1 | |
Anchor point | GR13G17990 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | GR13G17990 GR12G02880 GR10G13890 | 3 | ||
Tree-based ortholog | GR13G17990 GR12G02880 | 2 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ATR_00013G02200 | 1 | |
Tree-based ortholog | many-to-many | ATR_00077G02130 ATR_00077G02120 ATR_00013G02200 | 3 | ||
Arabidopsis lyrata | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AL2G09800 | 1 | |
Tree-based ortholog | many-to-1 | AL2G09800 | 1 | ||
Arabidopsis thaliana | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT1G65295 | 1 | |
Tree-based ortholog | many-to-1 | AT5G01015 | 1 | ||
Brassica rapa | Best-Hits-and-Inparalogs(BHI)family | many-to-many | BR07G23520 BR02G17470 | 2 | |
Tree-based ortholog | many-to-many | BR02G17470 BR07G23520 | 2 | ||
Capsella rubella | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRU_002G10260 | 1 | |
Tree-based ortholog | many-to-1 | CRU_024G00020 | 1 | ||
Carica papaya | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00039G00020 | 1 | |
Tree-based ortholog | many-to-1 | CP00039G00020 | 1 | ||
Citrullus lanatus | Anchor point | 1-to-1 | CL03G10580 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL03G10580 | 1 | ||
Tree-based ortholog | many-to-many | CL03G10580 CL11G04200 | 2 | ||
Citrus sinensis | Anchor point | 1-to-1 | CS00299G00050 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS00299G00050 | 1 | ||
Tree-based ortholog | many-to-1 | CS00299G00050 | 1 | ||
Cucumis melo | Anchor point | 1-to-1 | CM00012G00810 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00012G00810 | 1 | ||
Tree-based ortholog | many-to-many | CM00012G00810 CM00009G02430 | 2 | ||
Eucalyptus grandis | Anchor point | 1-to-1 | EG0008G11970 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | EG0008G11970 | 1 | ||
Tree-based ortholog | many-to-1 | EG0008G11970 | 1 | ||
Fragaria vesca | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FV6G07710 | 1 | |
Glycine max | Anchor point | 1-to-many | GM18G47650 GM09G38660 GM10G31361 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | GM09G38660 GM18G47650 | 2 | ||
Tree-based ortholog | many-to-many | GM09G38660 GM18G47650 | 2 | ||
Lotus japonicus | Best-Hits-and-Inparalogs(BHI)family | many-to-many | LJ1G034990 LJ1G035650 | 2 | |
Tree-based ortholog | many-to-many | LJ1G035650 LJ1G034990 | 2 | ||
Malus domestica | Best-Hits-and-Inparalogs(BHI)family | many-to-many | MD00G261060 MD00G160830 MD00G190460 | 3 | |
Tree-based ortholog | many-to-many | MD00G261060 MD00G190460 MD00G160830 | 3 | ||
Manihot esculenta | Anchor point | 1-to-1 | ME08757G00180 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ME02264G00420 | 1 | ||
Tree-based ortholog | many-to-many | ME02264G00420 ME08757G00180 | 2 | ||
Medicago truncatula | Anchor point | 1-to-1 | MT7G079830 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MT7G079830 | 1 | ||
Tree-based ortholog | many-to-1 | MT7G079830 | 1 | ||
Oryza sativa ssp. japonica | Anchor point | 1-to-1 | OS01G68840 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS11G27540 | 1 | ||
Tree-based ortholog | many-to-many | OS11G27540 OS11G02820 OS12G02800 | 3 | ||
Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00041G00070 PP00385G00040 PP00002G03500 ... | 5 | |
Tree-based ortholog | many-to-many | PP00014G00560 PP00041G00070 PP00385G00040 ... | 5 | ||
Populus trichocarpa | Anchor point | 1-to-1 | PT19G05310 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PT19G05310 | 1 | ||
Tree-based ortholog | many-to-1 | PT19G05310 | 1 | ||
Prunus persica | Anchor point | 1-to-1 | PPE_006G36270 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPE_006G36270 | 1 | ||
Tree-based ortholog | many-to-many | PPE_006G36270 PPE_001G12320 | 2 | ||
Ricinus communis | Anchor point | 1-to-1 | RC30128G04130 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC30128G04130 | 1 | ||
Tree-based ortholog | many-to-1 | RC30128G04130 | 1 | ||
Solanum lycopersicum | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL11G008910 | 1 | |
Tree-based ortholog | many-to-1 | SL11G008910 | 1 | ||
Solanum tuberosum | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST11G009800 | 1 | |
Tree-based ortholog | many-to-1 | ST11G009800 | 1 | ||
Thellungiella parvula | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP5G19980 | 1 | |
Tree-based ortholog | many-to-1 | TP6G41240 | 1 | ||
Theobroma cacao | Anchor point | 1-to-1 | TC0005G20120 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TC0005G20120 | 1 | ||
Tree-based ortholog | many-to-1 | TC0005G20120 | 1 | ||
Vitis vinifera | Anchor point | 1-to-1 | VV04G03480 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV04G03480 | 1 | ||
Tree-based ortholog | many-to-1 | VV04G03480 | 1 | ||
Zea mays | Best-Hits-and-Inparalogs(BHI)family | many-to-many | ZM02G22490 ZM04G05130 | 2 | |
Tree-based ortholog | many-to-many | ZM04G05130 ZM02G22490 ZM02G25490 ... | 4 |