Integrative Orthology Viewer: GR07G29280 (Gossypium raimondii)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Gossypium raimondii | Orthologous gene family | GR07G29280 GR11G04090 GR11G20020 ... | 4 | |
Anchor point | GR13G20390 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | GR07G29280 | 1 | ||
Tree-based ortholog | GR07G29280 GR13G20390 | 2 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-many | ATR_00003G00440 ATR_00045G01640 ATR_00047G00210 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00045G01640 | 1 | ||
Tree-based ortholog | many-to-1 | ATR_00045G01640 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-many | AL1G09260 AL3G40990 AL7G24700 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL1G09260 | 1 | ||
Tree-based ortholog | many-to-1 | AL1G09260 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT1G09570 AT2G18790 AT4G16250 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT1G09570 | 1 | ||
Tree-based ortholog | many-to-1 | AT1G09570 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-many | BV3G04210 BV6G07240 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV6G07240 | 1 | ||
Tree-based ortholog | many-to-1 | BV6G07240 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR01G09310 BR05G26480 BR06G06020 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR06G06020 | 1 | ||
Tree-based ortholog | many-to-many | BR06G06020 BR09G51140 | 2 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_001G08490 CRU_003G31810 CRU_007G22140 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_001G08490 | 1 | ||
Tree-based ortholog | many-to-1 | CRU_001G08490 | 1 | ||
Carica papaya | Orthologous gene family | many-to-many | CP00009G00520 CP00017G01000 CP00048G02300 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00048G02300 | 1 | ||
Tree-based ortholog | many-to-1 | CP00048G02300 | 1 | ||
Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | CR13G02200 CR02G01610 | 2 | |
Tree-based ortholog | many-to-many | CR14G01560 CR11G00260 | 2 | ||
Citrullus lanatus | Orthologous gene family | many-to-many | CL03G06930 CL05G07410 CL08G08880 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL08G08880 | 1 | ||
Tree-based ortholog | many-to-many | CL08G08880 CL08G08910 | 2 | ||
Citrus sinensis | Orthologous gene family | many-to-many | CS00007G01900 CS00016G01390 CS00102G00140 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00102G00140 | 1 | ||
Tree-based ortholog | many-to-1 | CS00102G00140 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-many | CM00006G08240 CM00066G00730 CM00096G00060 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00096G00060 | 1 | ||
Tree-based ortholog | many-to-many | CM00096G00060 CM00096G00100 | 2 | ||
Eucalyptus grandis | Orthologous gene family | many-to-many | EG0001G02950 EG0002G11170 EG0004G02650 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0002G11170 | 1 | ||
Tree-based ortholog | many-to-1 | EG0002G11170 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-many | FV0G36470 FV3G08690 FV6G03420 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV6G03420 | 1 | ||
Tree-based ortholog | many-to-1 | FV6G03420 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM03G38620 GM09G03990 GM10G28170 ... | 6 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM20G22160 GM10G28170 | 2 | ||
Tree-based ortholog | many-to-many | GM03G38620 GM19G41210 GM20G22160 ... | 4 | ||
Lotus japonicus | Orthologous gene family | many-to-many | LJ5G026440 LJ6G023820 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ5G026440 | 1 | ||
Tree-based ortholog | many-to-1 | LJ5G026440 | 1 | ||
Malus domestica | Orthologous gene family | many-to-many | MD00G085940 MD00G266050 MD00G266100 ... | 7 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD04G014900 MD00G085940 | 2 | ||
Tree-based ortholog | many-to-many | MD04G014900 MD00G085940 | 2 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME00708G00460 ME02264G00680 ME06582G00330 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME02264G00680 | 1 | ||
Tree-based ortholog | many-to-1 | ME02264G00680 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT1G085160 MT2G034040 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT1G085160 | 1 | ||
Tree-based ortholog | many-to-1 | MT1G085160 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS03G19590 OS03G51030 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS03G51030 | 1 | ||
Tree-based ortholog | many-to-1 | OS03G51030 | 1 | ||
Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL09G02040 | 1 | |
Tree-based ortholog | many-to-many | OL01G01660 OL01G04480 | 2 | ||
Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00164G00330 PP00047G00170 PP00233G00100 ... | 7 | |
Tree-based ortholog | many-to-many | PP00233G00100 PP00081G00760 PP00091G00620 ... | 8 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT08G10520 PT10G14590 PT13G00030 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT13G00030 | 1 | ||
Tree-based ortholog | many-to-1 | PT13G00030 | 1 | ||
Prunus persica | Orthologous gene family | many-to-many | PPE_001G11060 PPE_004G07040 PPE_006G30850 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_006G30850 | 1 | ||
Tree-based ortholog | many-to-1 | PPE_006G30850 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-many | RC29693G01130 RC29889G00660 RC30128G03840 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30128G03840 | 1 | ||
Tree-based ortholog | many-to-1 | RC30128G03840 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL01G059870 SL02G071260 SL05G053410 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL10G044670 | 1 | ||
Tree-based ortholog | many-to-1 | SL10G044670 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST01G018070 ST02G017600 ST05G026080 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST10G011220 | 1 | ||
Tree-based ortholog | many-to-1 | ST10G011220 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP1G08170 TP3G15270 TP7G15980 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP1G08170 | 1 | ||
Tree-based ortholog | many-to-1 | TP1G08170 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-many | TC0004G30140 TC0005G32860 TC0006G15490 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0005G32860 | 1 | ||
Tree-based ortholog | many-to-1 | TC0005G32860 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-1 | VV12G09660 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV14G10540 | 1 | ||
Tree-based ortholog | many-to-1 | VV14G10540 | 1 | ||
Zea mays | Orthologous gene family | many-to-many | ZM01G13510 ZM01G51020 ZM05G05260 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM05G05260 ZM01G51020 | 2 | ||
Tree-based ortholog | many-to-many | ZM01G51020 ZM05G05260 | 2 |