Integrative Orthology Viewer: GR05G23890 (Gossypium raimondii)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Gossypium raimondii | Orthologous gene family | GR05G23890 | 1 | |
Anchor point | GR02G00740 GR08G07480 GR13G04260 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | GR05G23890 | 1 | ||
Tree-based ortholog | GR13G04260 GR05G23890 | 2 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00126G00330 | 1 | |
Tree-based ortholog | many-to-1 | ATR_00126G00330 | 1 | ||
Arabidopsis lyrata | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL1G43900 | 1 | |
Tree-based ortholog | many-to-many | AL1G43900 AL3G20680 | 2 | ||
Arabidopsis thaliana | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT1G49620 | 1 | |
Tree-based ortholog | many-to-many | AT1G49620 AT3G19150 | 2 | ||
Beta vulgaris | Anchor point | many-to-1 | BV0G03660 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV0G03660 | 1 | ||
Tree-based ortholog | many-to-1 | BV0G03660 | 1 | ||
Brassica rapa | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR06G03370 | 1 | |
Tree-based ortholog | many-to-1 | BR03G35810 | 1 | ||
Capsella rubella | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_001G36910 | 1 | |
Tree-based ortholog | many-to-many | CRU_001G36910 CRU_003G18100 | 2 | ||
Carica papaya | Anchor point | many-to-many | CP00062G00280 CP00055G01660 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00062G00280 | 1 | ||
Tree-based ortholog | many-to-1 | CP00062G00280 | 1 | ||
Citrullus lanatus | Orthologous gene family | 1-to-1 | CL02G06000 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL02G06000 | 1 | ||
Tree-based ortholog | many-to-1 | CL07G00420 | 1 | ||
Citrus sinensis | Anchor point | many-to-1 | CS00006G02260 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00598G00070 | 1 | ||
Tree-based ortholog | many-to-1 | CS00598G00070 | 1 | ||
Cucumis melo | Orthologous gene family | 1-to-1 | CM00034G00450 | 1 | |
Anchor point | many-to-1 | CM00034G00450 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00034G00450 | 1 | ||
Tree-based ortholog | many-to-1 | CM00034G00450 | 1 | ||
Eucalyptus grandis | Anchor point | many-to-many | EG0008G16580 EG0007G10690 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | EG0007G10700 EG0007G10690 EG0005G12230 | 3 | ||
Tree-based ortholog | many-to-1 | EG0008G16580 | 1 | ||
Fragaria vesca | Anchor point | many-to-many | FV3G33420 FV1G18530 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV3G33420 | 1 | ||
Tree-based ortholog | many-to-1 | FV3G33420 | 1 | ||
Glycine max | Anchor point | many-to-many | GM07G33360 GM11G06050 GM01G39220 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM11G06050 GM01G39220 | 2 | ||
Tree-based ortholog | many-to-many | GM02G15100 GM07G33360 | 2 | ||
Lotus japonicus | Anchor point | many-to-1 | LJ4G012370 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ4G012370 | 1 | ||
Tree-based ortholog | many-to-1 | LJ4G012370 | 1 | ||
Malus domestica | Anchor point | many-to-1 | MD15G021790 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD00G510880 MD00G061090 MD00G168270 | 3 | ||
Tree-based ortholog | many-to-many | MD00G168270 MD00G061090 MD00G510880 | 3 | ||
Manihot esculenta | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME03175G00090 ME00319G00020 | 2 | |
Tree-based ortholog | many-to-1 | ME04393G00030 | 1 | ||
Medicago truncatula | Anchor point | many-to-many | MT5G017600 MT4G086450 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT5G017600 | 1 | ||
Tree-based ortholog | many-to-1 | MT5G017600 | 1 | ||
Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS10G33310 | 1 | |
Tree-based ortholog | many-to-1 | OS11G40030 | 1 | ||
Populus trichocarpa | Anchor point | many-to-many | PT04G14210 PT07G04230 PT09G10360 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT04G14210 PT09G10360 | 2 | ||
Tree-based ortholog | many-to-many | PT09G10360 PT04G14210 | 2 | ||
Prunus persica | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_001G00600 | 1 | |
Tree-based ortholog | many-to-1 | PPE_001G00600 | 1 | ||
Ricinus communis | Anchor point | many-to-many | RC29801G01480 RC30115G00070 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29801G01480 | 1 | ||
Tree-based ortholog | many-to-1 | RC29801G01480 | 1 | ||
Solanum lycopersicum | Anchor point | many-to-1 | SL02G090680 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL01G108610 | 1 | ||
Tree-based ortholog | many-to-1 | SL01G108610 | 1 | ||
Solanum tuberosum | Anchor point | many-to-many | ST01G045850 ST02G032160 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST01G045850 | 1 | ||
Tree-based ortholog | many-to-1 | ST01G045850 | 1 | ||
Thellungiella parvula | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP1G36490 | 1 | |
Tree-based ortholog | many-to-many | TP1G36490 TP3G17220 | 2 | ||
Theobroma cacao | Anchor point | many-to-many | TC0002G09450 TC0001G05140 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0002G09450 | 1 | ||
Tree-based ortholog | many-to-1 | TC0002G09450 | 1 | ||
Vitis vinifera | Anchor point | many-to-many | VV07G05650 VV03G06910 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | VV03G06910 VV07G05650 | 2 | ||
Tree-based ortholog | many-to-1 | VV03G06910 | 1 | ||
Zea mays | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM01G02910 | 1 | |
Tree-based ortholog | many-to-many | ZM04G02170 ZM09G01490 | 2 |