Integrative Orthology Viewer: GR04G25050 (Gossypium raimondii)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Gossypium raimondii | Orthologous gene family | GR04G25050 GR07G26190 GR07G34590 | 3 | |
Anchor point | GR07G34590 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | GR07G26190 GR04G25050 | 2 | ||
Tree-based ortholog | GR07G26190 GR04G25050 | 2 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ATR_00068G00320 | 1 | |
Tree-based ortholog | many-to-1 | ATR_00068G00320 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-1 | AL3G03380 | 1 | |
Anchor point | 1-to-1 | AL6G18130 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AL3G03380 | 1 | ||
Tree-based ortholog | many-to-many | AL6G18130 AL3G03380 | 2 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-1 | AT3G03860 | 1 | |
Anchor point | 1-to-many | AT5G18120 AT3G03860 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT3G03860 | 1 | ||
Tree-based ortholog | many-to-many | AT5G18120 AT3G03860 | 2 | ||
Beta vulgaris | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BV1G10820 | 1 | |
Tree-based ortholog | many-to-1 | BV1G10820 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR02G40030 BR03G29380 BR07G00750 | 3 | |
Anchor point | 1-to-many | BR02G40030 BR03G07790 BR07G00750 ... | 5 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BR02G40030 | 1 | ||
Tree-based ortholog | many-to-many | BR03G07790 BR10G16460 BR03G29380 ... | 5 | ||
Capsella rubella | Orthologous gene family | many-to-1 | CRU_003G02910 | 1 | |
Anchor point | 1-to-many | CRU_003G02910 CRU_006G16010 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRU_003G02910 | 1 | ||
Tree-based ortholog | many-to-many | CRU_006G16010 CRU_003G02910 | 2 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP00051G01340 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00051G01340 | 1 | ||
Tree-based ortholog | many-to-1 | CP00051G01340 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-1 | CL04G05410 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL08G10870 | 1 | ||
Tree-based ortholog | many-to-1 | CL04G05410 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-1 | CS00117G00250 | 1 | |
Anchor point | 1-to-1 | CS00117G00250 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS00117G00250 | 1 | ||
Tree-based ortholog | many-to-1 | CS00117G00250 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-1 | CM00010G00250 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00010G00250 | 1 | ||
Tree-based ortholog | many-to-1 | CM00010G00250 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0001G17520 | 1 | |
Anchor point | 1-to-1 | EG0011G12510 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | EG0001G17520 | 1 | ||
Tree-based ortholog | many-to-many | EG0011G12510 EG0001G17520 | 2 | ||
Fragaria vesca | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FV5G39520 | 1 | |
Tree-based ortholog | many-to-many | FV1G23250 FV1G23240 | 2 | ||
Glycine max | Orthologous gene family | many-to-many | GM16G04430 GM19G28980 | 2 | |
Anchor point | 1-to-1 | GM16G04430 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | GM19G28980 GM16G04430 | 2 | ||
Tree-based ortholog | many-to-many | GM19G28980 GM16G04430 GM16G27001 ... | 4 | ||
Lotus japonicus | Orthologous gene family | many-to-1 | LJ1G054410 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | LJ1G054410 | 1 | ||
Tree-based ortholog | many-to-1 | LJ1G054410 | 1 | ||
Malus domestica | Orthologous gene family | many-to-1 | MD14G000220 | 1 | |
Anchor point | 1-to-1 | MD14G000220 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MD14G000220 | 1 | ||
Tree-based ortholog | many-to-many | MD00G102130 MD14G000220 | 2 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME02431G00500 ME03614G02240 | 2 | |
Anchor point | 1-to-1 | ME02431G00500 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | ME02431G00500 ME03614G02240 | 2 | ||
Tree-based ortholog | many-to-many | ME02431G00500 ME03614G02240 | 2 | ||
Medicago truncatula | Orthologous gene family | many-to-1 | MT6G029240 | 1 | |
Anchor point | 1-to-1 | MT6G029240 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MT6G029240 | 1 | ||
Tree-based ortholog | many-to-1 | MT6G029240 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS03G59170 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS12G35640 | 1 | ||
Tree-based ortholog | many-to-1 | OS12G35640 | 1 | ||
Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PP00055G01300 | 1 | |
Tree-based ortholog | many-to-1 | PP00055G01300 | 1 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT13G05710 PT19G03570 | 2 | |
Anchor point | 1-to-1 | PT19G03570 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | PT13G05710 PT19G03570 | 2 | ||
Tree-based ortholog | many-to-many | PT19G03570 PT13G05710 | 2 | ||
Prunus persica | Orthologous gene family | many-to-1 | PPE_007G02800 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPE_007G02800 | 1 | ||
Tree-based ortholog | many-to-1 | PPE_007G02800 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-1 | RC29950G00070 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC29950G00070 | 1 | ||
Tree-based ortholog | many-to-1 | RC29950G00070 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-1 | SL01G005600 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL01G005600 | 1 | ||
Tree-based ortholog | many-to-1 | SL01G005600 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-1 | ST01G005820 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST01G005820 | 1 | ||
Tree-based ortholog | many-to-1 | ST01G005820 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-1 | TP3G02830 | 1 | |
Anchor point | 1-to-many | TP6G26190 TP3G02830 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP3G02830 | 1 | ||
Tree-based ortholog | many-to-many | TP6G26190 TP3G02830 | 2 | ||
Theobroma cacao | Orthologous gene family | many-to-1 | TC0005G24950 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TC0005G24950 | 1 | ||
Tree-based ortholog | many-to-1 | TC0005G24950 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-1 | VV08G08500 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV08G08500 | 1 | ||
Tree-based ortholog | many-to-1 | VV08G08500 | 1 | ||
Zea mays | Orthologous gene family | many-to-1 | ZM05G02260 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM05G02260 | 1 | ||
Tree-based ortholog | many-to-many | ZM10G04870 ZM03G17850 | 2 |