Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
GR04G16450
(Gossypium raimondii)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Gossypium raimondii | Best-Hits-and-Inparalogs(BHI)family | GR04G16450 | 1 |  |
| Orthologous gene family | GR03G11300 GR04G16450 GR08G10700 ... | 4 | ||
| Tree-based ortholog | GR04G16450 | 1 | ||
| Anchor point | GR08G10700 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00106G00950 | 1 | |
| Orthologous gene family | many-to-1 | ATR_00106G00950 | 1 | ||
| Tree-based ortholog | 1-to-1 | ATR_00106G00950 | 1 | ||
| Anchor point | 1-to-1 | ATR_00106G00950 | 1 | ||
| Arabidopsis lyrata | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL8G15610 | 1 | |
| Orthologous gene family | many-to-many | AL6G07390 AL8G15570 AL8G15610 | 3 | ||
| Tree-based ortholog | 1-to-many | AL8G15610 AL8G15570 AL6G07390 | 3 | ||
| Arabidopsis thaliana | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT5G07670 | 1 | |
| Orthologous gene family | many-to-many | AT5G07670 AT5G51370 AT5G51380 | 3 | ||
| Tree-based ortholog | 1-to-many | AT5G51380 AT5G51370 AT5G07670 | 3 | ||
| Beta vulgaris | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV0G64890 | 1 | |
| Orthologous gene family | many-to-1 | BV0G64890 | 1 | ||
| Tree-based ortholog | 1-to-1 | BV0G64890 | 1 | ||
| Anchor point | 1-to-1 | BV0G64890 | 1 | ||
| Brassica rapa | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR10G04560 | 1 | |
| Orthologous gene family | many-to-many | BR02G04800 BR03G14600 BR10G04560 ... | 4 | ||
| Tree-based ortholog | 1-to-1 | BR09G02140 | 1 | ||
| Capsella rubella | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_008G11220 | 1 | |
| Orthologous gene family | many-to-many | CRU_006G06510 CRU_008G11210 CRU_008G11220 | 3 | ||
| Tree-based ortholog | 1-to-many | CRU_008G11220 CRU_008G11210 CRU_006G06510 | 3 | ||
| Carica papaya | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP29748G00010 | 1 | |
| Orthologous gene family | many-to-1 | CP29748G00010 | 1 | ||
| Tree-based ortholog | 1-to-1 | CP29748G00010 | 1 | ||
| Citrullus lanatus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL07G16520 | 1 | |
| Orthologous gene family | many-to-many | CL07G16520 CL07G16530 | 2 | ||
| Tree-based ortholog | 1-to-many | CL07G16520 CL07G16530 | 2 | ||
| Citrus sinensis | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00224G00030 | 1 | |
| Orthologous gene family | many-to-1 | CS00224G00030 | 1 | ||
| Tree-based ortholog | 1-to-1 | CS00224G00030 | 1 | ||
| Cucumis melo | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00031G01340 | 1 | |
| Orthologous gene family | many-to-1 | CM00031G01340 | 1 | ||
| Tree-based ortholog | 1-to-1 | CM00031G01340 | 1 | ||
| Eucalyptus grandis | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0001G24710 | 1 | |
| Orthologous gene family | many-to-1 | EG0001G24710 | 1 | ||
| Tree-based ortholog | 1-to-1 | EG0001G24710 | 1 | ||
| Fragaria vesca | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV7G12260 | 1 | |
| Orthologous gene family | many-to-many | FV7G12260 FV7G32610 | 2 | ||
| Tree-based ortholog | 1-to-1 | FV7G12260 | 1 | ||
| Anchor point | 1-to-1 | FV7G12260 | 1 | ||
| Glycine max | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM09G36420 GM12G00910 | 2 | |
| Orthologous gene family | many-to-many | GM04G13930 GM06G47600 GM09G36420 ... | 4 | ||
| Tree-based ortholog | 1-to-many | GM06G47600 GM04G13930 GM12G00910 ... | 4 | ||
| Lotus japonicus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ3G011350 | 1 | |
| Orthologous gene family | many-to-many | LJ3G011350 LJ3G051460 | 2 | ||
| Tree-based ortholog | 1-to-many | LJ3G011350 LJ3G051460 | 2 | ||
| Malus domestica | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD00G186870 MD07G008240 | 2 | |
| Orthologous gene family | many-to-many | MD00G186870 MD07G008240 MD07G016590 | 3 | ||
| Tree-based ortholog | 1-to-many | MD07G008240 MD00G186870 | 2 | ||
| Manihot esculenta | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME04450G00240 ME08265G04840 | 2 | |
| Orthologous gene family | many-to-many | ME01127G00410 ME04450G00240 ME06701G00410 ... | 4 | ||
| Tree-based ortholog | 1-to-many | ME08265G04840 ME04450G00240 | 2 | ||
| Anchor point | 1-to-many | ME04450G00240 ME08265G04840 | 2 | ||
| Medicago truncatula | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT4G036815 | 1 | |
| Orthologous gene family | many-to-many | MT3G408430 MT4G036815 | 2 | ||
| Tree-based ortholog | 1-to-many | MT3G408430 MT4G036815 | 2 | ||
| Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS02G44104 | 1 | |
| Orthologous gene family | many-to-1 | OS02G44104 | 1 | ||
| Tree-based ortholog | 1-to-1 | OS02G44104 | 1 | ||
| Anchor point | 1-to-1 | OS02G44104 | 1 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00079G00730 PP00058G00300 | 2 | |
| Orthologous gene family | many-to-many | PP00058G00300 PP00079G00730 | 2 | ||
| Tree-based ortholog | 1-to-many | PP00058G00300 PP00079G00730 | 2 | ||
| Populus trichocarpa | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT14G05910 PT02G14320 | 2 | |
| Orthologous gene family | many-to-many | PT01G12580 PT02G14320 PT03G10790 ... | 4 | ||
| Tree-based ortholog | 1-to-many | PT14G05910 PT02G14320 | 2 | ||
| Anchor point | 1-to-many | PT02G14320 PT14G05910 | 2 | ||
| Prunus persica | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_002G13360 | 1 | |
| Orthologous gene family | many-to-many | PPE_002G13360 PPE_002G26470 | 2 | ||
| Tree-based ortholog | 1-to-1 | PPE_002G13360 | 1 | ||
| Anchor point | 1-to-1 | PPE_002G13360 | 1 | ||
| Ricinus communis | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30174G00690 | 1 | |
| Orthologous gene family | many-to-many | RC30147G01930 RC30174G00690 | 2 | ||
| Tree-based ortholog | 1-to-1 | RC30174G00690 | 1 | ||
| Anchor point | 1-to-1 | RC30174G00690 | 1 | ||
| Solanum lycopersicum | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL01G095800 | 1 | |
| Orthologous gene family | many-to-many | SL01G095800 SL03G093310 | 2 | ||
| Tree-based ortholog | 1-to-1 | SL01G095800 | 1 | ||
| Solanum tuberosum | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST01G033240 | 1 | |
| Orthologous gene family | many-to-many | ST01G033240 ST12G019040 | 2 | ||
| Tree-based ortholog | 1-to-1 | ST01G033240 | 1 | ||
| Thellungiella parvula | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP6G13550 | 1 | |
| Orthologous gene family | many-to-many | TP6G13550 TP6G35230 | 2 | ||
| Tree-based ortholog | 1-to-many | TP6G13550 TP6G35230 | 2 | ||
| Theobroma cacao | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0001G38100 | 1 | |
| Orthologous gene family | many-to-many | TC0001G38100 TC0003G15590 | 2 | ||
| Tree-based ortholog | 1-to-1 | TC0001G38100 | 1 | ||
| Anchor point | 1-to-1 | TC0001G38100 | 1 | ||
| Vitis vinifera | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV16G02670 | 1 | |
| Orthologous gene family | many-to-many | VV15G00430 VV16G02670 | 2 | ||
| Tree-based ortholog | 1-to-1 | VV15G00430 | 1 | ||
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM05G35610 | 1 | |
| Orthologous gene family | many-to-1 | ZM05G35610 | 1 | ||
| Tree-based ortholog | 1-to-1 | ZM05G35610 | 1 |