Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
GM16G07730
(Glycine max)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Glycine max | Orthologous gene family | GM16G07730 GM19G12410 | 2 |  |
| Tree-based ortholog | GM16G07730 GM19G12410 | 2 | ||
| Anchor point | GM19G12410 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | GM19G12410 GM16G07730 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00005G01940 | 1 | |
| Tree-based ortholog | many-to-many | ATR_00035G00480 ATR_00015G00020 ATR_00005G01940 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | ATR_00005G01940 ATR_00015G00020 | 2 | ||
| Arabidopsis lyrata | Orthologous gene family | many-to-1 | AL7G37420 | 1 | |
| Tree-based ortholog | many-to-1 | AL7G37420 | 1 | ||
| Anchor point | 1-to-1 | AL7G37420 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AL7G37420 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | many-to-1 | AT5G40470 | 1 | |
| Tree-based ortholog | many-to-1 | AT5G40470 | 1 | ||
| Anchor point | 1-to-1 | AT5G40470 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT5G40470 | 1 | ||
| Beta vulgaris | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BV7G10740 | 1 | |
| Brassica rapa | Orthologous gene family | many-to-1 | BR04G09860 | 1 | |
| Tree-based ortholog | many-to-1 | BR04G09860 | 1 | ||
| Anchor point | 1-to-1 | BR04G09860 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BR04G09860 | 1 | ||
| Capsella rubella | Orthologous gene family | many-to-1 | CRU_007G33810 | 1 | |
| Tree-based ortholog | many-to-1 | CRU_007G33810 | 1 | ||
| Anchor point | 1-to-1 | CRU_007G33810 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRU_007G33810 | 1 | ||
| Carica papaya | Orthologous gene family | many-to-1 | CP00130G00790 | 1 | |
| Tree-based ortholog | many-to-1 | CP00130G00790 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00130G00790 | 1 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR12G13090 | 1 | |
| Citrullus lanatus | Orthologous gene family | many-to-1 | CL10G12030 | 1 | |
| Tree-based ortholog | many-to-1 | CL10G12030 | 1 | ||
| Anchor point | 1-to-1 | CL10G12030 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL10G12030 | 1 | ||
| Citrus sinensis | Orthologous gene family | many-to-1 | CS00116G00130 | 1 | |
| Tree-based ortholog | many-to-1 | CS00116G00130 | 1 | ||
| Anchor point | 1-to-1 | CS00116G00130 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS00116G00130 | 1 | ||
| Cucumis melo | Orthologous gene family | many-to-1 | CM00098G00050 | 1 | |
| Tree-based ortholog | many-to-1 | CM00098G00050 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00098G00050 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-many | EG0008G15470 EG0010G19460 EG0012G00350 | 3 | |
| Tree-based ortholog | many-to-many | EG0012G00350 EG0008G15470 EG0010G19460 | 3 | ||
| Anchor point | 1-to-1 | EG0010G19460 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | EG0012G00350 EG0008G15470 EG0010G19460 | 3 | ||
| Fragaria vesca | Orthologous gene family | many-to-1 | FV0G39360 | 1 | |
| Tree-based ortholog | many-to-1 | FV0G39360 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FV0G39360 | 1 | ||
| Gossypium raimondii | Orthologous gene family | many-to-many | GR01G26500 GR12G06420 | 2 | |
| Tree-based ortholog | many-to-many | GR01G26500 GR12G06420 | 2 | ||
| Anchor point | 1-to-many | GR01G26500 GR12G06420 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GR12G06420 | 1 | ||
| Lotus japonicus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | LJ4G031400 | 1 | |
| Malus domestica | Orthologous gene family | many-to-many | MD00G236620 MD09G001800 MD17G001820 | 3 | |
| Tree-based ortholog | many-to-many | MD00G236620 MD17G001820 MD09G001800 | 3 | ||
| Anchor point | 1-to-many | MD09G001800 MD17G001820 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | MD09G001800 MD17G001820 MD00G236620 | 3 | ||
| Manihot esculenta | Orthologous gene family | many-to-1 | ME04137G00170 | 1 | |
| Tree-based ortholog | many-to-1 | ME04137G00170 | 1 | ||
| Anchor point | 1-to-1 | ME04137G00170 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ME04137G00170 | 1 | ||
| Medicago truncatula | Orthologous gene family | many-to-1 | MT7G033720 | 1 | |
| Tree-based ortholog | many-to-1 | MT7G033720 | 1 | ||
| Anchor point | 1-to-1 | MT7G033720 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MT7G033720 | 1 | ||
| Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS11G42160 | 1 | |
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00097G00820 PP00262G00150 | 2 | |
| Populus trichocarpa | Orthologous gene family | many-to-many | PT17G06480 PT17G06980 | 2 | |
| Tree-based ortholog | many-to-many | PT17G06980 PT17G06480 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | PT17G06980 PT17G06480 | 2 | ||
| Prunus persica | Orthologous gene family | many-to-1 | PPE_003G26860 | 1 | |
| Tree-based ortholog | many-to-1 | PPE_003G26860 | 1 | ||
| Anchor point | 1-to-1 | PPE_003G26860 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPE_003G26860 | 1 | ||
| Ricinus communis | Orthologous gene family | many-to-1 | RC29917G00680 | 1 | |
| Tree-based ortholog | many-to-1 | RC29917G00680 | 1 | ||
| Anchor point | 1-to-1 | RC29917G00680 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC29917G00680 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-1 | SL02G086440 | 1 | |
| Tree-based ortholog | many-to-1 | SL02G086440 | 1 | ||
| Anchor point | 1-to-1 | SL02G086440 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL02G086440 | 1 | ||
| Solanum tuberosum | Orthologous gene family | many-to-1 | ST02G036480 | 1 | |
| Tree-based ortholog | many-to-1 | ST02G036480 | 1 | ||
| Anchor point | 1-to-1 | ST02G036480 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST02G036480 | 1 | ||
| Thellungiella parvula | Orthologous gene family | many-to-1 | TP7G01440 | 1 | |
| Tree-based ortholog | many-to-1 | TP7G01440 | 1 | ||
| Anchor point | 1-to-1 | TP7G01440 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP7G01440 | 1 | ||
| Theobroma cacao | Orthologous gene family | many-to-1 | TC0004G01700 | 1 | |
| Tree-based ortholog | many-to-1 | TC0004G01700 | 1 | ||
| Anchor point | 1-to-1 | TC0004G01700 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TC0004G01700 | 1 | ||
| Vitis vinifera | Orthologous gene family | many-to-1 | VV14G11080 | 1 | |
| Tree-based ortholog | many-to-1 | VV14G11080 | 1 | ||
| Anchor point | 1-to-1 | VV14G11080 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV14G11080 | 1 | ||
| Zea mays | Orthologous gene family | many-to-1 | ZM05G32790 | 1 | |
| Tree-based ortholog | many-to-1 | ZM05G32790 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM05G32790 | 1 |