Integrative Orthology Viewer: GM12G28970 (Glycine max)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Glycine max | Orthologous gene family | GM12G28970 GM16G00580 | 2 | |
Tree-based ortholog | GM16G00580 GM12G28970 | 2 | ||
Anchor point | GM16G00580 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | GM12G28970 GM16G00580 | 2 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00017G00130 | 1 | |
Tree-based ortholog | many-to-many | ATR_00069G01460 ATR_00016G02090 ATR_00009G00270 ... | 5 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ATR_00017G00130 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-1 | AL2G07420 | 1 | |
Tree-based ortholog | many-to-many | AL4G33590 AL8G16160 AL7G36680 ... | 14 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AL2G07420 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-1 | AT1G58100 | 1 | |
Tree-based ortholog | many-to-many | AT2G45680 AT5G51910 AT5G41030 ... | 12 | ||
Anchor point | 1-to-1 | AT1G58100 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT1G58100 | 1 | ||
Beta vulgaris | Tree-based ortholog | many-to-many | BV0G30950 BV0G20490 BV6G11180 ... | 8 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BV6G02940 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-1 | BR09G15510 | 1 | |
Tree-based ortholog | many-to-many | BR03G22430 BR05G05190 BR02G16620 ... | 20 | ||
Anchor point | 1-to-1 | BR09G15510 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BR09G15510 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-1 | CRU_002G06190 | 1 | |
Tree-based ortholog | many-to-many | CRU_004G27310 CRU_008G11770 CRU_007G33120 ... | 11 | ||
Anchor point | 1-to-1 | CRU_002G06190 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRU_002G06190 | 1 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP00030G00340 | 1 | |
Tree-based ortholog | many-to-many | CP00018G01660 CP00004G01970 CP00070G01200 ... | 10 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00030G00340 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-1 | CL11G07560 | 1 | |
Tree-based ortholog | many-to-many | CL06G00200 CL05G08850 CL05G15020 ... | 12 | ||
Anchor point | 1-to-1 | CL11G07560 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL11G07560 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-1 | CS00291G00030 | 1 | |
Tree-based ortholog | many-to-many | CS00040G00400 CS00003G00190 CS00038G00240 ... | 7 | ||
Anchor point | 1-to-1 | CS00291G00030 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS00291G00030 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-1 | CM00016G01440 | 1 | |
Tree-based ortholog | many-to-many | CM00052G03070 CM00006G09780 CM00023G01680 ... | 13 | ||
Anchor point | 1-to-1 | CM00016G01440 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00016G01440 | 1 | ||
Eucalyptus grandis | Tree-based ortholog | many-to-many | EG0004G20050 EG0001G24170 EG0002G29360 ... | 7 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | EG0006G21270 | 1 | ||
Fragaria vesca | Tree-based ortholog | many-to-many | FV7G09920 FV7G39380 FV6G51300 ... | 8 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FV0G05690 | 1 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR02G21500 GR12G16650 | 2 | |
Tree-based ortholog | many-to-many | GR07G09420 GR08G24300 GR04G20690 ... | 24 | ||
Anchor point | 1-to-many | GR02G21500 GR12G16650 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GR12G16650 | 1 | ||
Lotus japonicus | Orthologous gene family | many-to-1 | LJ6G029940 | 1 | |
Tree-based ortholog | many-to-many | LJ4G023660 LJ5G033920 LJ1G050860 ... | 7 | ||
Anchor point | 1-to-1 | LJ6G029940 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | LJ6G029940 | 1 | ||
Malus domestica | Orthologous gene family | many-to-many | MD00G057150 MD00G186250 MD15G037230 | 3 | |
Tree-based ortholog | many-to-many | MD00G515790 MD06G009320 MD10G003070 ... | 23 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | MD00G057150 MD15G037230 MD00G186250 | 3 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME02538G00050 ME06914G01340 | 2 | |
Tree-based ortholog | many-to-many | ME03942G00380 ME04882G00460 ME03040G00010 ... | 17 | ||
Anchor point | 1-to-many | ME02538G00050 ME06914G01340 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | ME06914G01340 ME02538G00050 | 2 | ||
Medicago truncatula | Orthologous gene family | many-to-1 | MT2G006150 | 1 | |
Tree-based ortholog | many-to-many | MT8G033070 MT1G101810 MT7G028160 ... | 9 | ||
Anchor point | 1-to-1 | MT2G006150 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MT2G006150 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS12G07480 | 1 | |
Tree-based ortholog | many-to-many | OS08G43160 OS09G34950 OS01G69980 ... | 10 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS12G07480 | 1 | ||
Physcomitrella patens | Orthologous gene family | many-to-many | PP00067G00820 PP00348G00020 PP00356G00180 ... | 4 | |
Tree-based ortholog | many-to-many | PP00356G00180 PP00348G00020 PP00067G00820 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00348G00020 PP00067G00820 PP00446G00090 ... | 4 | ||
Populus trichocarpa | Orthologous gene family | many-to-1 | PT04G22210 | 1 | |
Tree-based ortholog | many-to-many | PT02G15220 PT14G07850 PT03G12020 ... | 19 | ||
Anchor point | 1-to-1 | PT04G22210 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PT04G22210 | 1 | ||
Prunus persica | Orthologous gene family | many-to-1 | PPE_001G53950 | 1 | |
Tree-based ortholog | many-to-many | PPE_002G15040 PPE_005G09720 PPE_003G28520 ... | 8 | ||
Anchor point | 1-to-1 | PPE_001G53950 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPE_001G53950 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-1 | RC30093G00150 | 1 | |
Tree-based ortholog | many-to-many | RC30174G01980 RC30147G00850 RC30131G01870 ... | 12 | ||
Anchor point | 1-to-1 | RC30093G00150 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC30093G00150 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL01G103780 SL06G065190 | 2 | |
Tree-based ortholog | many-to-1 | SL06G065190 | 1 | ||
Anchor point | 1-to-1 | SL01G103780 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL01G103780 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-1 | ST01G040740 | 1 | |
Tree-based ortholog | many-to-1 | ST06G024220 | 1 | ||
Anchor point | 1-to-1 | ST01G040740 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST01G040740 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-1 | TP2G05480 | 1 | |
Tree-based ortholog | many-to-many | TP4G27720 TP6G14160 TP7G00880 ... | 12 | ||
Anchor point | 1-to-1 | TP2G05480 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP2G05480 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-1 | TC0002G02460 | 1 | |
Tree-based ortholog | many-to-many | TC0001G36660 TC0003G26610 TC0003G16890 ... | 12 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TC0002G02460 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-1 | VV12G07370 | 1 | |
Tree-based ortholog | many-to-many | VV15G08660 VV02G07410 VV10G06430 ... | 5 | ||
Anchor point | 1-to-1 | VV12G07370 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV12G07370 | 1 | ||
Zea mays | Orthologous gene family | many-to-many | ZM03G19290 ZM10G02930 | 2 | |
Tree-based ortholog | many-to-many | ZM01G34580 ZM02G33830 ZM08G28700 ... | 17 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | ZM10G02930 ZM03G19290 | 2 |