Integrative Orthology Viewer: GM12G10240 (Glycine max)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Glycine max | Orthologous gene family | GM03G36260 GM06G46530 GM12G10240 ... | 6 | |
Tree-based ortholog | GM12G10240 GM06G46530 | 2 | ||
Anchor point | GM03G36260 GM13G38730 GM06G46530 ... | 5 | ||
Best-Hits-and-Inparalogs(BHI)family | GM12G10240 GM06G46530 | 2 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00004G01700 | 1 | |
Tree-based ortholog | many-to-1 | ATR_00004G01700 | 1 | ||
Anchor point | many-to-1 | ATR_00004G01700 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ATR_00004G01700 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-many | AL3G12100 AL5G22160 AL6G06050 | 3 | |
Tree-based ortholog | many-to-many | AL5G22160 AL3G12100 AL6G06050 | 3 | ||
Anchor point | many-to-1 | AL5G22160 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AL5G22160 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT2G35860 AT3G11700 AT3G52370 ... | 4 | |
Tree-based ortholog | many-to-many | AT2G35860 AT3G52370 AT3G11700 ... | 4 | ||
Anchor point | many-to-many | AT2G35860 AT3G11700 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT2G35860 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-many | BV5G19950 BV7G04240 | 2 | |
Tree-based ortholog | many-to-1 | BV5G19950 | 1 | ||
Anchor point | many-to-1 | BV7G04240 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BV7G04240 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR01G37060 BR03G02370 BR03G17670 ... | 7 | |
Tree-based ortholog | many-to-many | BR03G17670 BR04G21330 BR04G05830 ... | 7 | ||
Anchor point | many-to-many | BR01G37060 BR05G30930 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BR04G21330 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_003G10560 CRU_004G17040 CRU_005G17580 ... | 4 | |
Tree-based ortholog | many-to-many | CRU_004G17040 CRU_005G17580 CRU_003G10560 ... | 4 | ||
Anchor point | many-to-many | CRU_003G10560 CRU_004G17040 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRU_004G17040 | 1 | ||
Carica papaya | Orthologous gene family | many-to-many | CP00033G01060 CP00222G00250 | 2 | |
Tree-based ortholog | many-to-1 | CP00033G01060 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00033G01060 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-many | CL02G22610 CL03G11440 CL10G16100 | 3 | |
Tree-based ortholog | many-to-many | CL03G11440 CL02G22610 | 2 | ||
Anchor point | many-to-many | CL10G16100 CL02G22610 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL03G11440 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-1 | CS00264G00030 | 1 | |
Tree-based ortholog | many-to-1 | CS00254G00050 | 1 | ||
Anchor point | many-to-many | CS00018G01320 CS00254G00050 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS00264G00030 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-many | CM00011G05020 CM00024G01280 | 2 | |
Tree-based ortholog | many-to-1 | CM00024G01280 | 1 | ||
Anchor point | many-to-1 | CM00011G05020 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00024G01280 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-many | EG0001G21480 EG0002G31880 | 2 | |
Tree-based ortholog | many-to-1 | EG0002G31880 | 1 | ||
Anchor point | many-to-many | EG0001G21480 EG0002G31880 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | EG0002G31880 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-1 | FV3G40730 | 1 | |
Tree-based ortholog | many-to-1 | FV3G40730 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FV3G40730 | 1 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR06G14750 GR11G22830 GR13G00320 | 3 | |
Tree-based ortholog | many-to-many | GR11G22830 GR13G00320 | 2 | ||
Anchor point | many-to-1 | GR06G14750 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GR11G22830 | 1 | ||
Lotus japonicus | Orthologous gene family | many-to-1 | LJ3G018480 | 1 | |
Tree-based ortholog | many-to-1 | LJ3G018480 | 1 | ||
Anchor point | many-to-1 | LJ3G018480 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | LJ3G018480 | 1 | ||
Malus domestica | Orthologous gene family | many-to-many | MD12G003900 MD14G004150 | 2 | |
Tree-based ortholog | many-to-many | MD12G003900 MD14G004150 | 2 | ||
Anchor point | many-to-1 | MD12G003900 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | MD12G003900 MD14G004150 | 2 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME02892G01040 ME08542G00610 | 2 | |
Tree-based ortholog | many-to-many | ME02892G01040 ME08542G00610 | 2 | ||
Anchor point | many-to-1 | ME02892G01040 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | ME08542G00610 ME02892G01040 | 2 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT2G087810 MT4G050170 MT7G106760 | 3 | |
Tree-based ortholog | many-to-1 | MT4G050170 | 1 | ||
Anchor point | many-to-many | MT7G106760 MT2G087810 MT4G050170 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MT4G050170 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS03G57460 OS03G57490 OS07G06680 | 3 | |
Tree-based ortholog | many-to-many | OS03G57490 OS03G57460 OS07G06680 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS03G57460 | 1 | ||
Physcomitrella patens | Orthologous gene family | many-to-1 | PP00402G00330 | 1 | |
Tree-based ortholog | many-to-1 | PP00402G00330 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PP00402G00330 | 1 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT06G20030 PT08G01240 PT10G24490 ... | 6 | |
Tree-based ortholog | many-to-many | PT12G00620 PT19G00840 PT10G24490 ... | 4 | ||
Anchor point | many-to-many | PT06G20030 PT16G06650 PT10G24490 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | PT16G06650 PT06G20030 | 2 | ||
Prunus persica | Orthologous gene family | many-to-1 | PPE_007G11260 | 1 | |
Tree-based ortholog | many-to-1 | PPE_007G11260 | 1 | ||
Anchor point | many-to-1 | PPE_007G11260 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPE_007G11260 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-many | RC29333G00420 RC29854G00290 | 2 | |
Tree-based ortholog | many-to-1 | RC29854G00290 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC29333G00420 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-1 | SL10G081720 | 1 | |
Tree-based ortholog | many-to-1 | SL10G081720 | 1 | ||
Anchor point | many-to-1 | SL10G081720 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL10G081720 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-1 | ST10G026390 | 1 | |
Tree-based ortholog | many-to-many | ST10G026390 ST01G007390 | 2 | ||
Anchor point | many-to-many | ST10G026390 ST01G007390 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST10G026390 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP3G09930 TP4G18120 TP5G09920 ... | 4 | |
Tree-based ortholog | many-to-many | TP4G18120 TP5G09920 TP3G09930 ... | 4 | ||
Anchor point | many-to-many | TP3G09930 TP4G18120 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP5G09920 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-many | TC0005G10760 TC0010G11850 | 2 | |
Tree-based ortholog | many-to-1 | TC0010G11850 | 1 | ||
Anchor point | many-to-1 | TC0005G10760 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TC0010G11850 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-1 | VV08G01250 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV08G01250 | 1 | ||
Zea mays | Orthologous gene family | many-to-many | ZM01G55520 ZM05G02920 | 2 | |
Tree-based ortholog | many-to-many | ZM05G02920 ZM01G55520 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM05G02920 | 1 |