Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
GM09G23980
(Glycine max)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Glycine max | Orthologous gene family | GM09G23980 GM10G37441 GM16G29450 | 3 |  |
| Tree-based ortholog | GM09G23980 GM16G29450 | 2 | ||
| Anchor point | GM10G37441 GM16G29450 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | GM09G23980 GM16G29450 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00053G00410 | 1 | |
| Tree-based ortholog | many-to-1 | ATR_00053G00410 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ATR_00053G00410 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | many-to-1 | AL7G18610 | 1 | |
| Tree-based ortholog | many-to-1 | AL7G18610 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AL7G18610 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | many-to-many | AT4G11260 AT4G23570 | 2 | |
| Tree-based ortholog | many-to-many | AT4G23570 AT4G11260 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT4G11260 | 1 | ||
| Beta vulgaris | Orthologous gene family | many-to-1 | BV3G03150 | 1 | |
| Tree-based ortholog | many-to-1 | BV3G03150 | 1 | ||
| Anchor point | many-to-1 | BV3G03150 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BV3G03150 | 1 | ||
| Brassica rapa | Orthologous gene family | many-to-many | BR01G13550 BR03G25890 BR03G47230 ... | 4 | |
| Tree-based ortholog | many-to-many | BR01G13550 BR03G47230 BR06G20320 ... | 5 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BR08G10090 | 1 | ||
| Capsella rubella | Orthologous gene family | many-to-many | CRU_006G28980 CRU_007G16690 | 2 | |
| Tree-based ortholog | many-to-many | CRU_007G16690 CRU_006G28980 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRU_007G16690 | 1 | ||
| Carica papaya | Orthologous gene family | many-to-1 | CP00107G01320 | 1 | |
| Tree-based ortholog | many-to-many | CP00107G01320 CP00003G00010 | 2 | ||
| Anchor point | many-to-1 | CP00107G01320 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00107G01320 | 1 | ||
| Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR12G06640 | 1 | |
| Tree-based ortholog | many-to-1 | CR12G06640 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR12G06640 | 1 | ||
| Citrullus lanatus | Orthologous gene family | many-to-1 | CL05G09700 | 1 | |
| Tree-based ortholog | many-to-1 | CL05G09700 | 1 | ||
| Anchor point | many-to-1 | CL05G09700 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL05G09700 | 1 | ||
| Citrus sinensis | Orthologous gene family | many-to-1 | CS00097G00390 | 1 | |
| Tree-based ortholog | many-to-1 | CS00097G00390 | 1 | ||
| Anchor point | many-to-1 | CS00097G00390 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS00097G00390 | 1 | ||
| Cucumis melo | Orthologous gene family | many-to-1 | CM00006G10740 | 1 | |
| Tree-based ortholog | many-to-1 | CM00006G10740 | 1 | ||
| Anchor point | many-to-1 | CM00006G10740 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00006G10740 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0001G22960 | 1 | |
| Tree-based ortholog | many-to-1 | EG0004G14540 | 1 | ||
| Anchor point | many-to-1 | EG0001G22960 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | EG0001G22960 | 1 | ||
| Fragaria vesca | Orthologous gene family | many-to-1 | FV7G37530 | 1 | |
| Tree-based ortholog | many-to-1 | FV7G37530 | 1 | ||
| Anchor point | many-to-1 | FV7G37530 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FV7G37530 | 1 | ||
| Gossypium raimondii | Orthologous gene family | many-to-many | GR03G06950 GR04G11690 GR08G27340 | 3 | |
| Tree-based ortholog | many-to-many | GR04G11690 GR03G06950 GR08G27340 | 3 | ||
| Anchor point | many-to-many | GR08G27340 GR04G11690 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GR08G27340 | 1 | ||
| Lotus japonicus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | LJ2G034940 | 1 | |
| Malus domestica | Orthologous gene family | many-to-many | MD00G513990 MD01G020900 | 2 | |
| Tree-based ortholog | many-to-many | MD00G256780 MD00G178020 MD00G178060 ... | 6 | ||
| Anchor point | many-to-1 | MD01G020900 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | MD01G020900 MD00G513990 | 2 | ||
| Manihot esculenta | Orthologous gene family | many-to-1 | ME06089G00620 | 1 | |
| Tree-based ortholog | many-to-1 | ME06089G00620 | 1 | ||
| Anchor point | many-to-1 | ME06089G00620 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ME06089G00620 | 1 | ||
| Medicago truncatula | Orthologous gene family | many-to-many | MT5G009930 MT6G053290 | 2 | |
| Tree-based ortholog | many-to-1 | MT6G053290 | 1 | ||
| Anchor point | many-to-1 | MT6G053290 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MT6G053290 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS01G43540 | 1 | |
| Tree-based ortholog | many-to-1 | OS01G43540 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS01G43540 | 1 | ||
| Ostreococcus lucimarinus | Orthologous gene family | many-to-1 | OL07G00740 | 1 | |
| Tree-based ortholog | many-to-1 | OL07G00740 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL07G00740 | 1 | ||
| Physcomitrella patens | Orthologous gene family | many-to-1 | PP00244G00260 | 1 | |
| Tree-based ortholog | many-to-1 | PP00244G00260 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PP00244G00260 | 1 | ||
| Populus trichocarpa | Orthologous gene family | many-to-many | PT04G07020 PT04G07110 PT17G14980 | 3 | |
| Tree-based ortholog | many-to-many | PT04G07020 PT04G07110 PT17G14980 | 3 | ||
| Anchor point | many-to-many | PT17G14980 PT04G07020 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | PT04G07110 PT17G14980 | 2 | ||
| Prunus persica | Orthologous gene family | many-to-1 | PPE_002G28960 | 1 | |
| Tree-based ortholog | many-to-1 | PPE_002G28960 | 1 | ||
| Anchor point | many-to-1 | PPE_002G28960 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPE_002G28960 | 1 | ||
| Ricinus communis | Orthologous gene family | many-to-1 | RC30169G03480 | 1 | |
| Tree-based ortholog | many-to-1 | RC30169G03480 | 1 | ||
| Anchor point | many-to-many | RC30190G04480 RC30169G03480 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC30169G03480 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-many | SL03G007670 SL06G036420 | 2 | |
| Tree-based ortholog | many-to-many | SL06G036420 SL03G007670 | 2 | ||
| Anchor point | many-to-many | SL03G007670 SL06G036410 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL03G007670 | 1 | ||
| Solanum tuberosum | Orthologous gene family | many-to-many | ST03G012020 ST06G016340 | 2 | |
| Tree-based ortholog | many-to-many | ST06G016340 ST03G012020 | 2 | ||
| Anchor point | many-to-many | ST03G012020 ST06G016340 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST03G012020 | 1 | ||
| Thellungiella parvula | Orthologous gene family | many-to-many | TP6G06190 TP7G21490 | 2 | |
| Tree-based ortholog | many-to-many | TP7G21490 TP6G06190 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP6G06190 | 1 | ||
| Theobroma cacao | Orthologous gene family | many-to-1 | TC0003G18720 | 1 | |
| Tree-based ortholog | many-to-1 | TC0003G18720 | 1 | ||
| Anchor point | many-to-1 | TC0003G18720 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TC0003G18720 | 1 | ||
| Vitis vinifera | Orthologous gene family | many-to-1 | VV16G07610 | 1 | |
| Tree-based ortholog | many-to-1 | VV16G07610 | 1 | ||
| Anchor point | many-to-many | VV16G07610 VV02G03730 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV16G07610 | 1 | ||
| Zea mays | Orthologous gene family | many-to-many | ZM03G37200 ZM08G24120 | 2 | |
| Tree-based ortholog | many-to-many | ZM08G24120 ZM03G37200 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | ZM08G24120 ZM03G37200 | 2 |