Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
GM05G32500
(Glycine max)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Glycine max | Orthologous gene family | GM04G39120 GM05G32500 GM08G16660 ... | 8 |  |
| Anchor point | GM04G39120 GM08G16660 GM06G15860 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | GM08G16660 GM05G32500 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | many-to-many | ATR_00011G00280 ATR_00044G00690 ATR_00150G00050 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ATR_00150G00050 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | many-to-many | AL1G05100 AL1G06070 AL3G33450 ... | 5 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AL3G33450 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | many-to-many | AT1G05570 AT1G06490 AT2G13680 ... | 6 | |
| Anchor point | many-to-1 | AT2G13680 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT2G13680 | 1 | ||
| Beta vulgaris | Orthologous gene family | many-to-many | BV4G11960 BV6G07260 BV9G04650 | 3 | |
| Anchor point | many-to-1 | BV6G07260 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BV6G07260 | 1 | ||
| Brassica rapa | Orthologous gene family | many-to-many | BR02G06130 BR05G12090 BR07G16050 ... | 8 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BR09G07580 | 1 | ||
| Capsella rubella | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRU_004G18130 | 1 | |
| Carica papaya | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00189G00090 | 1 | |
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | many-to-many | CR03G09340 CR03G09670 CR03G09600 ... | 5 | |
| Citrullus lanatus | Anchor point | many-to-1 | CL02G01610 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | CL02G01610 CL02G01630 | 2 | ||
| Citrus sinensis | Orthologous gene family | many-to-many | CS00078G00030 CS00101G00050 | 2 | |
| Anchor point | many-to-1 | CS00078G00030 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS00078G00030 | 1 | ||
| Cucumis melo | Anchor point | many-to-1 | CM00059G00540 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00025G04660 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0010G07330 | 1 | |
| Anchor point | many-to-1 | EG0009G01580 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | EG0010G07330 | 1 | ||
| Fragaria vesca | Anchor point | many-to-1 | FV1G21270 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FV1G21270 | 1 | ||
| Gossypium raimondii | Orthologous gene family | many-to-many | GR04G09250 GR04G09260 GR11G11990 ... | 5 | |
| Anchor point | many-to-many | GR11G11990 GR12G04000 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | GR11G11990 GR11G12030 | 2 | ||
| Lotus japonicus | Anchor point | many-to-1 | LJ4G043050 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | LJ4G043050 | 1 | ||
| Malus domestica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MD17G017530 | 1 | |
| Manihot esculenta | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ME06948G00580 | 1 | |
| Medicago truncatula | Orthologous gene family | many-to-many | MT1G116370 MT2G061380 MT3G047390 ... | 6 | |
| Anchor point | many-to-many | MT8G093630 MT3G096200 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MT8G093630 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS03G03610 OS06G08380 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS06G08380 | 1 | ||
| Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL07G01670 | 1 | |
| Physcomitrella patens | Orthologous gene family | many-to-1 | PP00199G00060 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PP00199G00060 | 1 | ||
| Populus trichocarpa | Orthologous gene family | many-to-many | PT01G01220 PT01G23000 PT02G05870 ... | 6 | |
| Anchor point | many-to-1 | PT05G05830 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PT05G05830 | 1 | ||
| Prunus persica | Orthologous gene family | many-to-1 | PPE_003G15700 | 1 | |
| Anchor point | many-to-1 | PPE_004G30240 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPE_004G30240 | 1 | ||
| Ricinus communis | Orthologous gene family | many-to-many | RC28035G00040 RC29734G00090 RC30226G00460 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC29691G00050 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-many | SL01G006370 SL07G056260 SL11G005980 | 3 | |
| Anchor point | many-to-1 | SL11G005980 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL11G005980 | 1 | ||
| Solanum tuberosum | Orthologous gene family | many-to-many | ST01G006780 ST07G023390 ST11G005460 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST11G005460 | 1 | ||
| Thellungiella parvula | Orthologous gene family | many-to-many | TP1G04410 TP1G05250 TP3G27070 ... | 6 | |
| Anchor point | many-to-1 | TP3G27070 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP3G27070 | 1 | ||
| Theobroma cacao | Orthologous gene family | many-to-many | TC0001G12670 TC0001G15920 TC0009G21440 | 3 | |
| Anchor point | many-to-1 | TC0001G12670 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TC0001G12670 | 1 | ||
| Vitis vinifera | Orthologous gene family | many-to-many | VV04G05090 VV06G06810 VV13G00640 | 3 | |
| Anchor point | many-to-1 | VV04G05090 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV04G05090 | 1 | ||
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM06G09710 | 1 | |