Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
GM04G32324
(Glycine max)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Glycine max | Orthologous gene family | GM04G32324 GM06G22240 | 2 |  |
| Tree-based ortholog | GM04G32324 GM06G22240 | 2 | ||
| Anchor point | GM05G00300 GM06G22240 GM18G50371 ... | 6 | ||
| Best-Hits-and-Inparalogs(BHI)family | GM06G22240 GM04G32324 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Tree-based ortholog | many-to-1 | ATR_00154G00470 | 1 | |
| Anchor point | many-to-1 | ATR_00154G00470 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ATR_00154G00470 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | many-to-1 | AL8G27140 | 1 | |
| Tree-based ortholog | many-to-1 | AL8G27140 | 1 | ||
| Anchor point | many-to-many | AL6G07800 AL8G27140 AL3G01230 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AL8G27140 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | many-to-1 | AT5G60970 | 1 | |
| Tree-based ortholog | many-to-1 | AT5G60970 | 1 | ||
| Anchor point | many-to-many | AT5G08070 AT5G60970 AT3G02150 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT5G60970 | 1 | ||
| Beta vulgaris | Orthologous gene family | many-to-1 | BV0G76180 | 1 | |
| Tree-based ortholog | many-to-1 | BV0G76180 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BV0G76180 | 1 | ||
| Brassica rapa | Orthologous gene family | many-to-many | BR02G37940 BR03G40640 | 2 | |
| Tree-based ortholog | many-to-many | BR03G40640 BR02G37940 | 2 | ||
| Anchor point | many-to-many | BR03G40640 BR02G37940 BR05G35790 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | BR03G40640 BR02G37940 | 2 | ||
| Capsella rubella | Orthologous gene family | many-to-1 | CRU_008G21040 | 1 | |
| Tree-based ortholog | many-to-1 | CRU_008G21040 | 1 | ||
| Anchor point | many-to-many | CRU_003G01200 CRU_006G06820 CRU_008G21040 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRU_008G21040 | 1 | ||
| Carica papaya | Orthologous gene family | many-to-1 | CP00094G00580 | 1 | |
| Tree-based ortholog | many-to-1 | CP00094G00580 | 1 | ||
| Anchor point | many-to-many | CP00014G01890 CP00094G00580 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00094G00580 | 1 | ||
| Citrullus lanatus | Orthologous gene family | many-to-1 | CL06G16140 | 1 | |
| Tree-based ortholog | many-to-1 | CL06G16140 | 1 | ||
| Anchor point | many-to-many | CL04G11520 CL06G16140 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL06G16140 | 1 | ||
| Citrus sinensis | Orthologous gene family | many-to-1 | CS00030G00970 | 1 | |
| Tree-based ortholog | many-to-1 | CS00030G00970 | 1 | ||
| Anchor point | many-to-1 | CS00030G00970 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS00030G00970 | 1 | ||
| Cucumis melo | Orthologous gene family | many-to-1 | CM00030G01560 | 1 | |
| Tree-based ortholog | many-to-1 | CM00030G01560 | 1 | ||
| Anchor point | many-to-many | CM00001G01270 CM00030G01560 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00030G01560 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0002G05250 | 1 | |
| Tree-based ortholog | many-to-1 | EG0002G05250 | 1 | ||
| Anchor point | many-to-many | EG0009G17100 EG0011G21160 EG0002G05250 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | EG0002G05250 | 1 | ||
| Fragaria vesca | Orthologous gene family | many-to-1 | FV5G11920 | 1 | |
| Tree-based ortholog | many-to-1 | FV5G11920 | 1 | ||
| Anchor point | many-to-many | FV6G42330 FV5G11920 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FV5G11920 | 1 | ||
| Gossypium raimondii | Orthologous gene family | many-to-1 | GR08G19970 | 1 | |
| Tree-based ortholog | many-to-1 | GR01G07670 | 1 | ||
| Anchor point | many-to-many | GR08G19970 GR01G07670 GR12G04850 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GR08G19970 | 1 | ||
| Lotus japonicus | Tree-based ortholog | many-to-1 | LJ6G024510 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | LJ6G024510 | 1 | ||
| Malus domestica | Orthologous gene family | many-to-many | MD06G016760 MD14G020190 | 2 | |
| Tree-based ortholog | many-to-many | MD14G020190 MD06G016760 | 2 | ||
| Anchor point | many-to-many | MD14G020190 MD17G005200 MD06G016760 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | MD06G016760 MD14G020190 | 2 | ||
| Manihot esculenta | Orthologous gene family | many-to-many | ME06656G01030 ME08359G01580 | 2 | |
| Tree-based ortholog | many-to-1 | ME08359G01580 | 1 | ||
| Anchor point | many-to-many | ME08359G01580 ME06609G00030 ME06656G01030 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | ME06656G01030 ME08359G01580 | 2 | ||
| Medicago truncatula | Orthologous gene family | many-to-1 | MT3G026050 | 1 | |
| Tree-based ortholog | many-to-many | MT4G109660 MT3G026050 | 2 | ||
| Anchor point | many-to-many | MT3G026050 MT4G109660 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MT3G026050 | 1 | ||
| Oryza sativa ssp. japonica | Tree-based ortholog | many-to-many | OS05G43760 OS01G55750 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS01G55750 | 1 | ||
| Physcomitrella patens | Tree-based ortholog | many-to-many | PP00207G00640 PP00332G00220 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00332G00220 PP00207G00640 | 2 | ||
| Populus trichocarpa | Orthologous gene family | many-to-many | PT00G11900 PT15G05880 | 2 | |
| Tree-based ortholog | many-to-1 | PT15G05880 | 1 | ||
| Anchor point | many-to-many | PT17G09480 PT04G11610 PT15G05880 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | PT15G05880 PT00G11900 | 2 | ||
| Prunus persica | Orthologous gene family | many-to-1 | PPE_005G20980 | 1 | |
| Tree-based ortholog | many-to-1 | PPE_005G20980 | 1 | ||
| Anchor point | many-to-many | PPE_005G20980 PPE_003G23190 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPE_005G20980 | 1 | ||
| Ricinus communis | Orthologous gene family | many-to-1 | RC30138G01280 | 1 | |
| Tree-based ortholog | many-to-1 | RC30138G01280 | 1 | ||
| Anchor point | many-to-many | RC30138G01280 RC29905G00210 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC30138G01280 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-1 | SL03G115010 | 1 | |
| Tree-based ortholog | many-to-1 | SL06G069460 | 1 | ||
| Anchor point | many-to-many | SL03G115010 SL02G065800 SL02G089020 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL03G115010 | 1 | ||
| Solanum tuberosum | Orthologous gene family | many-to-1 | ST03G028540 | 1 | |
| Tree-based ortholog | many-to-1 | ST06G026410 | 1 | ||
| Anchor point | many-to-many | ST02G012660 ST02G033910 ST03G028540 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST03G028540 | 1 | ||
| Thellungiella parvula | Orthologous gene family | many-to-1 | TP2G24280 | 1 | |
| Tree-based ortholog | many-to-1 | TP2G24280 | 1 | ||
| Anchor point | many-to-many | TP2G24280 TP3G01220 TP6G34880 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP2G24280 | 1 | ||
| Theobroma cacao | Orthologous gene family | many-to-1 | TC0003G10700 | 1 | |
| Tree-based ortholog | many-to-1 | TC0003G10700 | 1 | ||
| Anchor point | many-to-many | TC0003G10700 TC0004G10190 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TC0003G10700 | 1 | ||
| Vitis vinifera | Orthologous gene family | many-to-1 | VV17G04620 | 1 | |
| Tree-based ortholog | many-to-1 | VV17G04620 | 1 | ||
| Anchor point | many-to-many | VV14G13070 VV17G04620 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV14G13070 | 1 | ||
| Zea mays | Tree-based ortholog | many-to-many | ZM06G28350 ZM08G19060 ZM03G31110 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM03G31110 | 1 |