Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
GM04G03276
(Glycine max)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Glycine max | Orthologous gene family | GM04G03276 GM06G03361 | 2 |  |
| Tree-based ortholog | GM04G03276 GM06G03361 | 2 | ||
| Anchor point | GM06G03361 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | GM04G03276 GM06G03361 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00011G00950 | 1 | |
| Tree-based ortholog | many-to-1 | ATR_00011G00950 | 1 | ||
| Anchor point | 1-to-1 | ATR_00011G00950 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ATR_00011G00950 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | many-to-1 | AL2G24200 | 1 | |
| Tree-based ortholog | many-to-1 | AL2G24200 | 1 | ||
| Anchor point | 1-to-1 | AL2G24200 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AL2G24200 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | many-to-1 | AT1G75330 | 1 | |
| Tree-based ortholog | many-to-1 | AT1G75330 | 1 | ||
| Anchor point | 1-to-1 | AT1G75330 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT1G75330 | 1 | ||
| Beta vulgaris | Orthologous gene family | many-to-1 | BV3G07100 | 1 | |
| Tree-based ortholog | many-to-1 | BV3G07100 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BV3G07100 | 1 | ||
| Brassica rapa | Orthologous gene family | many-to-1 | BR07G19990 | 1 | |
| Tree-based ortholog | many-to-1 | BR07G19990 | 1 | ||
| Anchor point | 1-to-many | BR02G23080 BR07G19990 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BR07G19990 | 1 | ||
| Capsella rubella | Orthologous gene family | many-to-1 | CRU_002G20920 | 1 | |
| Tree-based ortholog | many-to-1 | CRU_002G20920 | 1 | ||
| Anchor point | 1-to-1 | CRU_002G20920 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRU_002G20920 | 1 | ||
| Carica papaya | Orthologous gene family | many-to-1 | CP01000G00010 | 1 | |
| Tree-based ortholog | many-to-1 | CP01000G00010 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP01000G00010 | 1 | ||
| Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR12G01880 | 1 | |
| Tree-based ortholog | many-to-1 | CR12G01880 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR12G01880 | 1 | ||
| Citrullus lanatus | Orthologous gene family | many-to-1 | CL05G19940 | 1 | |
| Tree-based ortholog | many-to-1 | CL05G19940 | 1 | ||
| Anchor point | 1-to-1 | CL05G19940 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL05G19940 | 1 | ||
| Citrus sinensis | Orthologous gene family | many-to-1 | CS00002G04490 | 1 | |
| Tree-based ortholog | many-to-1 | CS00002G04490 | 1 | ||
| Anchor point | 1-to-1 | CS00002G04490 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS00002G04490 | 1 | ||
| Cucumis melo | Orthologous gene family | many-to-1 | CM01596G05350 | 1 | |
| Tree-based ortholog | many-to-1 | CM01596G05350 | 1 | ||
| Anchor point | 1-to-1 | CM01596G05350 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM01596G05350 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0006G15340 | 1 | |
| Tree-based ortholog | many-to-1 | EG0006G15340 | 1 | ||
| Anchor point | 1-to-1 | EG0006G15340 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | EG0006G15340 | 1 | ||
| Fragaria vesca | Orthologous gene family | many-to-1 | FV2G50620 | 1 | |
| Tree-based ortholog | many-to-1 | FV2G50620 | 1 | ||
| Anchor point | 1-to-1 | FV2G50620 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FV2G50620 | 1 | ||
| Gossypium raimondii | Orthologous gene family | many-to-1 | GR09G20070 | 1 | |
| Tree-based ortholog | many-to-1 | GR09G20070 | 1 | ||
| Anchor point | 1-to-1 | GR09G20070 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GR09G20070 | 1 | ||
| Lotus japonicus | Orthologous gene family | many-to-many | LJ1G029580 LJ5G001580 | 2 | |
| Tree-based ortholog | many-to-1 | LJ1G029580 | 1 | ||
| Anchor point | 1-to-many | LJ5G001580 LJ1G029580 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | LJ1G029580 | 1 | ||
| Malus domestica | Orthologous gene family | many-to-1 | MD00G247000 | 1 | |
| Tree-based ortholog | many-to-1 | MD00G247000 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MD00G247000 | 1 | ||
| Manihot esculenta | Orthologous gene family | many-to-1 | ME02978G00260 | 1 | |
| Tree-based ortholog | many-to-1 | ME02978G00260 | 1 | ||
| Anchor point | 1-to-1 | ME02978G00260 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ME02978G00260 | 1 | ||
| Medicago truncatula | Orthologous gene family | many-to-many | MT1G022420 MT3G112050 | 2 | |
| Tree-based ortholog | many-to-1 | MT3G112050 | 1 | ||
| Anchor point | 1-to-many | MT3G112050 MT1G022420 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MT3G112050 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS02G47590 | 1 | |
| Tree-based ortholog | many-to-1 | OS02G47590 | 1 | ||
| Anchor point | 1-to-1 | OS02G47590 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS02G47590 | 1 | ||
| Ostreococcus lucimarinus | Orthologous gene family | many-to-1 | OL01G01480 | 1 | |
| Tree-based ortholog | many-to-1 | OL01G01480 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL01G01480 | 1 | ||
| Physcomitrella patens | Orthologous gene family | many-to-many | PP00189G00540 PP00213G00030 | 2 | |
| Tree-based ortholog | many-to-many | PP00213G00030 PP00189G00540 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00189G00540 PP00213G00030 | 2 | ||
| Populus trichocarpa | Orthologous gene family | many-to-1 | PT05G22940 | 1 | |
| Tree-based ortholog | many-to-1 | PT02G03370 | 1 | ||
| Anchor point | 1-to-many | PT05G22940 PT02G03370 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PT05G22940 | 1 | ||
| Prunus persica | Orthologous gene family | many-to-1 | PPE_001G38450 | 1 | |
| Tree-based ortholog | many-to-1 | PPE_001G38450 | 1 | ||
| Anchor point | 1-to-1 | PPE_001G38450 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPE_001G38450 | 1 | ||
| Ricinus communis | Orthologous gene family | many-to-1 | RC30170G04240 | 1 | |
| Tree-based ortholog | many-to-1 | RC30170G04240 | 1 | ||
| Anchor point | 1-to-1 | RC30170G04240 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC30170G04240 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-many | SL04G080610 SL12G089210 | 2 | |
| Tree-based ortholog | many-to-many | SL12G089210 SL04G080610 | 2 | ||
| Anchor point | 1-to-many | SL04G080610 SL12G089210 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL12G089210 | 1 | ||
| Solanum tuberosum | Orthologous gene family | many-to-many | ST04G034010 ST12G027390 | 2 | |
| Tree-based ortholog | many-to-many | ST12G027390 ST04G034010 | 2 | ||
| Anchor point | 1-to-many | ST12G027390 ST04G034010 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST04G034010 | 1 | ||
| Thellungiella parvula | Orthologous gene family | many-to-1 | TP5G30470 | 1 | |
| Tree-based ortholog | many-to-1 | TP5G30470 | 1 | ||
| Anchor point | 1-to-1 | TP5G30470 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP5G30470 | 1 | ||
| Theobroma cacao | Orthologous gene family | many-to-1 | TC0008G02910 | 1 | |
| Tree-based ortholog | many-to-1 | TC0008G02910 | 1 | ||
| Anchor point | 1-to-1 | TC0008G02910 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TC0008G02910 | 1 | ||
| Vitis vinifera | Orthologous gene family | many-to-1 | VV18G09170 | 1 | |
| Tree-based ortholog | many-to-1 | VV18G09170 | 1 | ||
| Anchor point | 1-to-1 | VV18G09170 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV18G09170 | 1 | ||
| Zea mays | Orthologous gene family | many-to-many | ZM04G22160 ZM05G37880 | 2 | |
| Tree-based ortholog | many-to-many | ZM05G40780 ZM05G05860 ZM04G22160 ... | 4 | ||
| Anchor point | 1-to-1 | ZM05G37880 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | ZM04G22160 ZM05G37880 | 2 |