Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
GM03G35700
(Glycine max)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Glycine max | Orthologous gene family | GM03G35700 GM19G38340 | 2 |  |
| Tree-based ortholog | GM03G35700 GM19G38340 | 2 | ||
| Anchor point | GM07G05381 GM02G36090 GM19G38340 ... | 5 | ||
| Best-Hits-and-Inparalogs(BHI)family | GM10G08871 GM19G38340 GM03G35700 | 3 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Tree-based ortholog | many-to-1 | ATR_00114G00660 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ATR_00114G00660 | 1 | ||
| Arabidopsis lyrata | Tree-based ortholog | many-to-many | AL4G21500 AL6G05850 AL3G11970 | 3 | |
| Anchor point | many-to-many | AL4G21500 AL3G11970 AL6G05850 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AL4G21500 | 1 | ||
| Arabidopsis thaliana | Tree-based ortholog | many-to-many | AT2G36080 AT5G06250 AT3G11580 | 3 | |
| Anchor point | many-to-many | AT5G06250 AT2G36080 AT3G11580 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT2G36080 | 1 | ||
| Beta vulgaris | Tree-based ortholog | many-to-1 | BV7G11330 | 1 | |
| Anchor point | many-to-1 | BV7G11330 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BV7G11330 | 1 | ||
| Brassica rapa | Tree-based ortholog | many-to-many | BR05G08890 BR04G21560 BR03G02290 ... | 7 | |
| Anchor point | many-to-many | BR04G21560 BR05G31040 BR05G08890 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BR03G02290 | 1 | ||
| Capsella rubella | Tree-based ortholog | many-to-many | CRU_004G17240 CRU_006G05020 CRU_003G10440 | 3 | |
| Anchor point | many-to-many | CRU_006G05020 CRU_004G17240 CRU_003G10440 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRU_006G05020 | 1 | ||
| Carica papaya | Tree-based ortholog | many-to-1 | CP29173G00010 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP29173G00010 | 1 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR13G00150 | 1 | |
| Citrullus lanatus | Tree-based ortholog | many-to-1 | CL10G16770 | 1 | |
| Anchor point | many-to-1 | CL10G16770 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL10G16770 | 1 | ||
| Citrus sinensis | Tree-based ortholog | many-to-1 | CS00018G00620 | 1 | |
| Anchor point | many-to-1 | CS00018G00620 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS00018G00620 | 1 | ||
| Cucumis melo | Tree-based ortholog | many-to-1 | CM00011G04310 | 1 | |
| Anchor point | many-to-1 | CM00011G04310 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00011G04310 | 1 | ||
| Eucalyptus grandis | Tree-based ortholog | many-to-1 | EG0001G22150 | 1 | |
| Anchor point | many-to-1 | EG0001G22150 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | EG0001G22150 | 1 | ||
| Fragaria vesca | Tree-based ortholog | many-to-1 | FV6G31520 | 1 | |
| Anchor point | many-to-1 | FV6G31520 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FV6G31520 | 1 | ||
| Gossypium raimondii | Tree-based ortholog | many-to-many | GR06G15240 GR09G39900 GR02G23790 | 3 | |
| Anchor point | many-to-many | GR02G23790 GR09G39900 GR06G15240 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GR06G15240 | 1 | ||
| Lotus japonicus | Tree-based ortholog | many-to-many | LJ1G075270 LJ3G035390 | 2 | |
| Anchor point | many-to-1 | LJ1G075270 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | LJ3G035390 | 1 | ||
| Malus domestica | Tree-based ortholog | many-to-1 | MD00G497440 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MD00G497440 | 1 | ||
| Manihot esculenta | Tree-based ortholog | many-to-1 | ME11279G00090 | 1 | |
| Anchor point | many-to-many | ME02892G00340 ME11279G00090 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ME02892G00340 | 1 | ||
| Medicago truncatula | Orthologous gene family | many-to-1 | MT7G105370 | 1 | |
| Tree-based ortholog | many-to-1 | MT7G105370 | 1 | ||
| Anchor point | many-to-many | MT1G058350 MT7G105370 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MT7G105370 | 1 | ||
| Oryza sativa ssp. japonica | Tree-based ortholog | many-to-many | OS11G05740 OS12G06080 | 2 | |
| Anchor point | many-to-many | OS12G06080 OS11G05740 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | OS12G06080 OS11G05740 | 2 | ||
| Physcomitrella patens | Tree-based ortholog | many-to-many | PP00135G00390 PP00063G00290 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00063G00290 PP00135G00390 | 2 | ||
| Populus trichocarpa | Tree-based ortholog | many-to-1 | PT16G07450 | 1 | |
| Anchor point | many-to-many | PT16G07450 PT06G20810 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PT06G20810 | 1 | ||
| Prunus persica | Tree-based ortholog | many-to-1 | PPE_007G12260 | 1 | |
| Anchor point | many-to-1 | PPE_007G12260 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPE_007G12260 | 1 | ||
| Ricinus communis | Tree-based ortholog | many-to-1 | RC30032G00110 | 1 | |
| Anchor point | many-to-1 | RC30032G00110 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC30032G00110 | 1 | ||
| Solanum lycopersicum | Tree-based ortholog | many-to-1 | SL10G083210 | 1 | |
| Anchor point | many-to-1 | SL10G083210 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL09G010230 | 1 | ||
| Solanum tuberosum | Tree-based ortholog | many-to-1 | ST10G025920 | 1 | |
| Anchor point | many-to-many | ST10G025920 ST09G009750 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST09G009750 | 1 | ||
| Thellungiella parvula | Tree-based ortholog | many-to-many | TP4G18310 TP6G36630 TP3G09820 | 3 | |
| Anchor point | many-to-many | TP3G09820 TP6G36630 TP4G18310 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP6G36630 | 1 | ||
| Theobroma cacao | Tree-based ortholog | many-to-1 | TC0005G09410 | 1 | |
| Anchor point | many-to-1 | TC0005G09410 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TC0005G09410 | 1 | ||
| Vitis vinifera | Tree-based ortholog | many-to-1 | VV08G12460 | 1 | |
| Anchor point | many-to-1 | VV08G12460 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV08G12460 | 1 | ||
| Zea mays | Tree-based ortholog | many-to-many | ZM04G30040 ZM10G02100 | 2 | |
| Anchor point | many-to-many | ZM10G02100 ZM04G30040 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM10G02100 | 1 |