Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
GM01G39490
(Glycine max)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Glycine max | Orthologous gene family | GM01G39490 | 1 |  |
| Tree-based ortholog | GM01G39490 GM11G05760 | 2 | ||
| Anchor point | GM11G05760 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | GM01G39490 GM11G05760 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | 1-to-many | ATR_00035G00390 ATR_00045G03150 | 2 | |
| Tree-based ortholog | many-to-many | ATR_00035G00390 ATR_00045G03150 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | ATR_00045G03150 ATR_00035G00390 | 2 | ||
| Arabidopsis lyrata | Orthologous gene family | 1-to-1 | AL4G03070 | 1 | |
| Tree-based ortholog | many-to-1 | AL4G03070 | 1 | ||
| Anchor point | 1-to-1 | AL4G03070 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AL4G03070 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | 1-to-1 | AT2G23380 | 1 | |
| Tree-based ortholog | many-to-1 | AT2G23380 | 1 | ||
| Anchor point | 1-to-1 | AT2G23380 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT2G23380 | 1 | ||
| Beta vulgaris | Orthologous gene family | 1-to-1 | BV5G18030 | 1 | |
| Tree-based ortholog | many-to-1 | BV5G18030 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BV5G18030 | 1 | ||
| Brassica rapa | Tree-based ortholog | many-to-1 | BR04G13230 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BR04G13230 | 1 | ||
| Capsella rubella | Tree-based ortholog | many-to-1 | CRU_004G02500 | 1 | |
| Anchor point | 1-to-1 | CRU_004G02500 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRU_004G02500 | 1 | ||
| Carica papaya | Tree-based ortholog | many-to-1 | CP00055G01220 | 1 | |
| Anchor point | 1-to-1 | CP00055G01220 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00018G00450 | 1 | ||
| Chlamydomonas reinhardtii | Tree-based ortholog | many-to-1 | CR17G11200 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR17G11200 | 1 | ||
| Citrullus lanatus | Orthologous gene family | 1-to-1 | CL10G09680 | 1 | |
| Tree-based ortholog | many-to-1 | CL02G12610 | 1 | ||
| Anchor point | 1-to-1 | CL02G12610 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL02G12610 | 1 | ||
| Citrus sinensis | Orthologous gene family | 1-to-1 | CS00001G06560 | 1 | |
| Tree-based ortholog | many-to-1 | CS00006G01890 | 1 | ||
| Anchor point | 1-to-1 | CS00006G01890 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS00006G01890 | 1 | ||
| Cucumis melo | Tree-based ortholog | many-to-1 | CM00045G01380 | 1 | |
| Anchor point | 1-to-1 | CM00045G01380 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00031G03890 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | 1-to-1 | EG0008G14460 | 1 | |
| Tree-based ortholog | many-to-many | EG0008G14780 EG0008G14460 | 2 | ||
| Anchor point | 1-to-1 | EG0008G14460 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | EG0008G14460 | 1 | ||
| Fragaria vesca | Tree-based ortholog | many-to-1 | FV1G18040 | 1 | |
| Anchor point | 1-to-1 | FV1G18040 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FV1G18040 | 1 | ||
| Gossypium raimondii | Orthologous gene family | 1-to-many | GR07G21520 GR08G13910 | 2 | |
| Tree-based ortholog | many-to-many | GR07G21520 GR11G10610 | 2 | ||
| Anchor point | 1-to-many | GR11G10610 GR07G21520 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | GR07G21520 GR11G10610 | 2 | ||
| Lotus japonicus | Tree-based ortholog | many-to-1 | LJ5G027430 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | LJ5G027430 | 1 | ||
| Malus domestica | Tree-based ortholog | many-to-1 | MD02G015690 | 1 | |
| Anchor point | 1-to-many | MD15G022340 MD02G015690 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MD02G015690 | 1 | ||
| Manihot esculenta | Orthologous gene family | 1-to-1 | ME03060G00420 | 1 | |
| Tree-based ortholog | many-to-1 | ME03060G00420 | 1 | ||
| Anchor point | 1-to-1 | ME03060G00420 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ME03060G00420 | 1 | ||
| Medicago truncatula | Orthologous gene family | 1-to-1 | MT5G016870 | 1 | |
| Tree-based ortholog | many-to-1 | MT5G016870 | 1 | ||
| Anchor point | 1-to-1 | MT5G016870 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MT5G016870 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | 1-to-1 | OS06G16390 | 1 | |
| Tree-based ortholog | many-to-1 | OS06G16390 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS06G16390 | 1 | ||
| Ostreococcus lucimarinus | Tree-based ortholog | many-to-1 | OL20G01490 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL20G01490 | 1 | ||
| Physcomitrella patens | Tree-based ortholog | many-to-1 | PP00100G00780 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PP00100G00780 | 1 | ||
| Populus trichocarpa | Orthologous gene family | 1-to-many | PT05G14020 PT07G04580 | 2 | |
| Tree-based ortholog | many-to-many | PT05G14020 PT07G04580 | 2 | ||
| Anchor point | 1-to-many | PT07G04580 PT05G14020 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | PT05G14020 PT07G04580 | 2 | ||
| Prunus persica | Orthologous gene family | 1-to-1 | PPE_007G15280 | 1 | |
| Tree-based ortholog | many-to-1 | PPE_007G15280 | 1 | ||
| Anchor point | 1-to-1 | PPE_007G15280 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPE_007G15280 | 1 | ||
| Ricinus communis | Tree-based ortholog | many-to-1 | RC30115G00700 | 1 | |
| Anchor point | 1-to-1 | RC30115G00700 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC30076G02140 | 1 | ||
| Solanum lycopersicum | Tree-based ortholog | many-to-many | SL03G044380 SL02G093200 | 2 | |
| Anchor point | 1-to-many | SL02G093190 SL03G044380 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL03G044380 | 1 | ||
| Solanum tuberosum | Orthologous gene family | 1-to-1 | ST02G031670 | 1 | |
| Tree-based ortholog | many-to-many | ST10G015660 ST02G031670 | 2 | ||
| Anchor point | 1-to-1 | ST02G031670 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST10G015660 | 1 | ||
| Thellungiella parvula | Orthologous gene family | 1-to-1 | TP4G02390 | 1 | |
| Tree-based ortholog | many-to-1 | TP4G02390 | 1 | ||
| Anchor point | 1-to-1 | TP4G02390 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP4G02390 | 1 | ||
| Theobroma cacao | Orthologous gene family | 1-to-1 | TC0001G05670 | 1 | |
| Tree-based ortholog | many-to-1 | TC0001G05670 | 1 | ||
| Anchor point | 1-to-1 | TC0001G05670 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TC0001G05670 | 1 | ||
| Vitis vinifera | Tree-based ortholog | many-to-1 | VV07G05240 | 1 | |
| Anchor point | 1-to-1 | VV07G05240 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV07G05240 | 1 | ||
| Zea mays | Orthologous gene family | 1-to-1 | ZM06G09370 | 1 | |
| Tree-based ortholog | many-to-1 | ZM06G09370 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM06G09370 | 1 |