Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
GM01G24520
(Glycine max)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Glycine max | Orthologous gene family | GM01G24520 GM03G12260 | 2 |  |
| Tree-based ortholog | GM01G24520 GM03G12260 | 2 | ||
| Anchor point | GM03G12260 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | GM01G24520 GM03G12260 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00012G03430 | 1 | |
| Tree-based ortholog | many-to-1 | ATR_00012G03430 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ATR_00012G03430 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | many-to-1 | AL5G23940 | 1 | |
| Tree-based ortholog | many-to-1 | AL5G23940 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AL5G23940 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | many-to-1 | AT3G53900 | 1 | |
| Tree-based ortholog | many-to-1 | AT3G53900 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT3G53900 | 1 | ||
| Beta vulgaris | Orthologous gene family | many-to-1 | BV0G66210 | 1 | |
| Tree-based ortholog | many-to-many | BV0G66210 BV0G35780 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BV0G66210 | 1 | ||
| Brassica rapa | Orthologous gene family | many-to-many | BR07G14000 BR09G35020 | 2 | |
| Tree-based ortholog | many-to-many | BR07G14000 BR09G35020 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BR09G35020 | 1 | ||
| Capsella rubella | Orthologous gene family | many-to-1 | CRU_005G19250 | 1 | |
| Tree-based ortholog | many-to-1 | CRU_005G19250 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRU_005G19250 | 1 | ||
| Carica papaya | Orthologous gene family | many-to-1 | CP00056G00220 | 1 | |
| Tree-based ortholog | many-to-many | CP00056G00260 CP00056G00220 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00056G00220 | 1 | ||
| Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR11G02510 | 1 | |
| Tree-based ortholog | many-to-1 | CR11G02510 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR11G02510 | 1 | ||
| Citrullus lanatus | Orthologous gene family | many-to-1 | CL04G07750 | 1 | |
| Tree-based ortholog | many-to-1 | CL04G07750 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL04G07750 | 1 | ||
| Citrus sinensis | Orthologous gene family | many-to-1 | CS01396G00010 | 1 | |
| Tree-based ortholog | many-to-1 | CS01396G00010 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS01396G00010 | 1 | ||
| Cucumis melo | Orthologous gene family | many-to-1 | CM00002G01030 | 1 | |
| Tree-based ortholog | many-to-1 | CM00002G01030 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00002G01030 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0002G22180 | 1 | |
| Tree-based ortholog | many-to-1 | EG0002G22180 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | EG0002G22180 | 1 | ||
| Fragaria vesca | Orthologous gene family | many-to-1 | FV6G12210 | 1 | |
| Tree-based ortholog | many-to-1 | FV6G12210 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FV6G12210 | 1 | ||
| Gossypium raimondii | Orthologous gene family | many-to-1 | GR06G17020 | 1 | |
| Tree-based ortholog | many-to-1 | GR06G17020 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GR06G17020 | 1 | ||
| Lotus japonicus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | LJ2G049060 | 1 | |
| Malus domestica | Orthologous gene family | many-to-many | MD00G180840 MD00G180850 | 2 | |
| Tree-based ortholog | many-to-many | MD00G180840 MD12G013880 MD00G180850 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | MD00G180840 MD00G180850 | 2 | ||
| Manihot esculenta | Orthologous gene family | many-to-1 | ME07465G00020 | 1 | |
| Tree-based ortholog | many-to-1 | ME07465G00020 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ME07465G00020 | 1 | ||
| Medicago truncatula | Orthologous gene family | many-to-1 | MT4G020090 | 1 | |
| Tree-based ortholog | many-to-1 | MT4G020090 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MT4G020090 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS05G38170 | 1 | |
| Tree-based ortholog | many-to-1 | OS05G38170 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS05G38170 | 1 | ||
| Ostreococcus lucimarinus | Orthologous gene family | many-to-1 | OL07G03500 | 1 | |
| Tree-based ortholog | many-to-1 | OL07G03500 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL07G03500 | 1 | ||
| Physcomitrella patens | Orthologous gene family | many-to-1 | PP00131G00040 | 1 | |
| Tree-based ortholog | many-to-1 | PP00131G00040 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PP00131G00040 | 1 | ||
| Populus trichocarpa | Orthologous gene family | many-to-1 | PT06G09100 | 1 | |
| Tree-based ortholog | many-to-1 | PT06G09100 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PT06G09100 | 1 | ||
| Prunus persica | Orthologous gene family | many-to-1 | PPE_006G27000 | 1 | |
| Tree-based ortholog | many-to-1 | PPE_006G27000 | 1 | ||
| Anchor point | 1-to-1 | PPE_006G27000 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPE_006G27000 | 1 | ||
| Ricinus communis | Orthologous gene family | many-to-1 | RC29973G00120 | 1 | |
| Tree-based ortholog | many-to-1 | RC29973G00120 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC29973G00120 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-1 | SL09G011300 | 1 | |
| Tree-based ortholog | many-to-1 | SL09G011300 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL09G011300 | 1 | ||
| Solanum tuberosum | Orthologous gene family | many-to-1 | ST09G008660 | 1 | |
| Tree-based ortholog | many-to-1 | ST09G008660 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST09G008660 | 1 | ||
| Thellungiella parvula | Orthologous gene family | many-to-1 | TP5G08500 | 1 | |
| Tree-based ortholog | many-to-1 | TP5G08500 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP5G08500 | 1 | ||
| Theobroma cacao | Orthologous gene family | many-to-1 | TC0005G03040 | 1 | |
| Tree-based ortholog | many-to-1 | TC0005G03040 | 1 | ||
| Anchor point | 1-to-1 | TC0005G03040 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TC0005G03040 | 1 | ||
| Vitis vinifera | Orthologous gene family | many-to-1 | VV08G13910 | 1 | |
| Tree-based ortholog | many-to-1 | VV08G13910 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV08G13910 | 1 | ||
| Zea mays | Orthologous gene family | many-to-1 | ZM06G25640 | 1 | |
| Tree-based ortholog | many-to-1 | ZM06G25640 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM06G25640 | 1 |