Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
FV3G12070
(Fragaria vesca)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Fragaria vesca | Orthologous gene family | FV3G12070 | 1 |  |
| Tree-based ortholog | FV3G12070 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | FV3G12070 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | 1-to-1 | ATR_00057G00510 | 1 | |
| Tree-based ortholog | 1-to-1 | ATR_00068G01800 | 1 | ||
| Anchor point | N/A | ATR_00068G01800 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00068G01800 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | 1-to-1 | AL6G39310 | 1 | |
| Tree-based ortholog | 1-to-many | AL7G22150 AL1G32100 | 2 | ||
| Anchor point | N/A | AL7G22150 AL1G32100 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL1G32100 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | 1-to-1 | AT4G02120 | 1 | |
| Tree-based ortholog | 1-to-many | AT4G20320 AT2G34890 AT1G30820 | 3 | ||
| Anchor point | N/A | AT4G20320 AT1G30820 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT1G30820 | 1 | ||
| Beta vulgaris | Orthologous gene family | 1-to-1 | BV5G14710 | 1 | |
| Tree-based ortholog | 1-to-1 | BV4G16500 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV5G11960 | 1 | ||
| Brassica rapa | Orthologous gene family | 1-to-1 | BR02G26750 | 1 | |
| Tree-based ortholog | 1-to-many | BR07G03530 BR01G11010 BR03G45450 ... | 6 | ||
| Anchor point | N/A | BR01G11010 BR09G27820 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR09G27820 | 1 | ||
| Capsella rubella | Orthologous gene family | 1-to-1 | CRU_006G33840 | 1 | |
| Tree-based ortholog | 1-to-many | CRU_007G19920 CRU_004G16010 CRU_001G27910 | 3 | ||
| Anchor point | N/A | CRU_007G19920 CRU_001G27910 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_001G27910 | 1 | ||
| Carica papaya | Orthologous gene family | 1-to-many | CP00030G00400 CP31283G00010 | 2 | |
| Tree-based ortholog | 1-to-1 | CP00030G00400 | 1 | ||
| Anchor point | N/A | CP00030G00400 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00018G00050 | 1 | ||
| Chlamydomonas reinhardtii | Tree-based ortholog | 1-to-1 | CR09G09390 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR09G09390 | 1 | ||
| Citrullus lanatus | Orthologous gene family | 1-to-1 | CL09G04930 | 1 | |
| Tree-based ortholog | 1-to-1 | CL01G26070 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL01G26070 | 1 | ||
| Citrus sinensis | Orthologous gene family | 1-to-many | CS00008G01280 CS00270G00300 | 2 | |
| Tree-based ortholog | 1-to-1 | CS00008G01280 | 1 | ||
| Anchor point | N/A | CS00008G01280 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00052G00040 | 1 | ||
| Cucumis melo | Orthologous gene family | 1-to-1 | CM00026G02640 | 1 | |
| Tree-based ortholog | 1-to-1 | CM00007G00010 | 1 | ||
| Anchor point | N/A | CM00007G00010 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00007G00010 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | 1-to-1 | EG0011G29900 | 1 | |
| Tree-based ortholog | 1-to-1 | EG0005G32840 | 1 | ||
| Anchor point | N/A | EG0005G32840 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0006G11840 | 1 | ||
| Glycine max | Orthologous gene family | 1-to-many | GM02G01770 GM10G01840 | 2 | |
| Tree-based ortholog | 1-to-many | GM16G19580 GM08G33510 | 2 | ||
| Anchor point | N/A | GM08G25030 GM08G17120 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM16G19580 GM08G33510 | 2 | ||
| Gossypium raimondii | Orthologous gene family | 1-to-many | GR04G05080 GR07G12460 | 2 | |
| Tree-based ortholog | 1-to-1 | GR08G05240 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR08G05240 | 1 | ||
| Lotus japonicus | Orthologous gene family | 1-to-1 | LJ5G027790 | 1 | |
| Tree-based ortholog | 1-to-1 | LJ3G012970 | 1 | ||
| Anchor point | N/A | LJ3G012970 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ3G012970 | 1 | ||
| Malus domestica | Orthologous gene family | 1-to-many | MD03G025250 MD05G009830 | 2 | |
| Tree-based ortholog | 1-to-many | MD05G009830 MD10G018500 | 2 | ||
| Anchor point | N/A | MD05G009830 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD10G018500 | 1 | ||
| Manihot esculenta | Orthologous gene family | 1-to-many | ME04457G00150 ME07301G00180 | 2 | |
| Tree-based ortholog | 1-to-1 | ME10183G00080 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME10183G00080 | 1 | ||
| Medicago truncatula | Orthologous gene family | 1-to-1 | MT1G087440 | 1 | |
| Tree-based ortholog | 1-to-1 | MT8G070540 | 1 | ||
| Anchor point | N/A | MT2G062770 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT8G070540 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | 1-to-1 | OS12G36950 | 1 | |
| Tree-based ortholog | 1-to-many | OS05G49770 OS01G46570 OS05G49460 ... | 5 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS01G43020 | 1 | ||
| Ostreococcus lucimarinus | Tree-based ortholog | 1-to-1 | OL01G03830 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL01G03830 | 1 | ||
| Physcomitrella patens | Orthologous gene family | 1-to-many | PP00108G00570 PP00161G00380 | 2 | |
| Tree-based ortholog | 1-to-many | PP00108G00570 PP00161G00380 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00108G00570 PP00161G00380 | 2 | ||
| Populus trichocarpa | Orthologous gene family | 1-to-1 | PT14G12320 | 1 | |
| Tree-based ortholog | 1-to-many | PT01G07310 PT03G15790 | 2 | ||
| Anchor point | N/A | PT03G15790 PT01G07310 PT08G08020 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT01G07310 PT03G15790 | 2 | ||
| Prunus persica | Orthologous gene family | 1-to-many | PPE_005G05300 PPE_008G28180 | 2 | |
| Tree-based ortholog | 1-to-1 | PPE_004G11730 | 1 | ||
| Anchor point | N/A | PPE_004G11730 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_004G11730 | 1 | ||
| Ricinus communis | Orthologous gene family | 1-to-1 | RC30076G02480 | 1 | |
| Tree-based ortholog | 1-to-1 | RC30162G00020 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30162G00020 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | 1-to-1 | SL01G079650 | 1 | |
| Tree-based ortholog | 1-to-many | SL06G016800 SL01G056850 SL02G082190 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL02G082190 | 1 | ||
| Solanum tuberosum | Orthologous gene family | 1-to-1 | ST01G023960 | 1 | |
| Tree-based ortholog | 1-to-many | ST01G014330 ST02G025550 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST02G025550 | 1 | ||
| Thellungiella parvula | Orthologous gene family | 1-to-1 | TP6G02020 | 1 | |
| Tree-based ortholog | 1-to-many | TP7G18660 TP4G17170 TP1G26710 | 3 | ||
| Anchor point | N/A | TP7G18660 TP1G26710 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP1G26710 | 1 | ||
| Theobroma cacao | Orthologous gene family | 1-to-1 | TC0001G30840 | 1 | |
| Tree-based ortholog | 1-to-1 | TC0002G00020 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0002G00020 | 1 | ||
| Vitis vinifera | Orthologous gene family | 1-to-1 | VV07G08980 | 1 | |
| Tree-based ortholog | 1-to-1 | VV01G01990 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV19G09280 | 1 | ||
| Zea mays | Orthologous gene family | 1-to-many | ZM03G17420 ZM03G36050 | 2 | |
| Tree-based ortholog | 1-to-many | ZM08G11010 ZM08G24790 ZM03G36050 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM08G23800 | 1 |