Integrative Orthology Viewer: FV0G00050 (Fragaria vesca)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Fragaria vesca | Orthologous gene family | FV0G00050 FV1G07980 | 2 | |
Tree-based ortholog | FV0G00050 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | FV0G00050 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-many | ATR_00033G01810 ATR_00085G00640 | 2 | |
Tree-based ortholog | 1-to-1 | ATR_00085G00640 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00085G00640 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-1 | AL7G17690 | 1 | |
Tree-based ortholog | 1-to-1 | AL7G17690 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL7G17690 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT1G10760 AT4G24450 | 2 | |
Tree-based ortholog | 1-to-1 | AT1G10760 | 1 | ||
Anchor point | N/A | AT1G10760 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT1G10760 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-1 | BV0G28940 | 1 | |
Tree-based ortholog | 1-to-1 | BV0G28940 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV0G28940 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR01G14470 BR05G14370 BR09G50380 | 3 | |
Tree-based ortholog | 1-to-many | BR09G50380 BR05G14370 | 2 | ||
Anchor point | N/A | BR09G50380 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR05G14370 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_001G09830 CRU_007G15740 | 2 | |
Tree-based ortholog | 1-to-1 | CRU_001G09830 | 1 | ||
Anchor point | N/A | CRU_001G09830 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_001G09830 | 1 | ||
Carica papaya | Orthologous gene family | many-to-many | CP00069G00890 CP00069G00900 | 2 | |
Tree-based ortholog | 1-to-1 | CP00069G00900 | 1 | ||
Anchor point | N/A | CP00069G00890 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00069G00900 | 1 | ||
Chlamydomonas reinhardtii | Orthologous gene family | many-to-many | CR07G01600 CR07G01640 | 2 | |
Tree-based ortholog | 1-to-many | CR07G01600 CR07G01640 CR07G05000 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | CR07G01640 CR07G01600 | 2 | ||
Citrullus lanatus | Orthologous gene family | many-to-1 | CL05G26480 | 1 | |
Tree-based ortholog | 1-to-1 | CL05G26480 | 1 | ||
Anchor point | N/A | CL05G26480 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL05G26480 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-many | CS00003G02160 CS00008G00110 | 2 | |
Tree-based ortholog | 1-to-1 | CS00003G02160 | 1 | ||
Anchor point | N/A | CS00003G02160 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00003G02160 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-1 | CM00016G02890 | 1 | |
Tree-based ortholog | 1-to-1 | CM00016G02890 | 1 | ||
Anchor point | N/A | CM00016G02890 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00016G02890 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0008G20370 | 1 | |
Tree-based ortholog | 1-to-1 | EG0008G20370 | 1 | ||
Anchor point | N/A | EG0008G20370 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0008G20370 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM08G39110 GM18G20600 | 2 | |
Tree-based ortholog | 1-to-many | GM18G20600 GM08G39110 | 2 | ||
Anchor point | N/A | GM08G39110 GM18G20600 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM18G20600 GM08G39110 | 2 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR02G18620 GR08G16040 GR09G22810 | 3 | |
Tree-based ortholog | 1-to-many | GR02G18620 GR08G16040 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR02G18620 | 1 | ||
Lotus japonicus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ5G041900 | 1 | |
Malus domestica | Orthologous gene family | many-to-many | MD13G007050 MD16G005570 | 2 | |
Tree-based ortholog | 1-to-many | MD13G007050 MD16G005570 | 2 | ||
Anchor point | N/A | MD13G007050 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD16G005570 | 1 | ||
Manihot esculenta | Orthologous gene family | many-to-1 | ME12211G00020 | 1 | |
Tree-based ortholog | 1-to-1 | ME12211G00020 | 1 | ||
Anchor point | N/A | ME12211G00020 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME12211G00020 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-1 | MT8G069760 | 1 | |
Tree-based ortholog | 1-to-1 | MT8G069760 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT8G069760 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS06G30310 | 1 | |
Tree-based ortholog | 1-to-1 | OS06G30310 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS06G30310 | 1 | ||
Ostreococcus lucimarinus | Orthologous gene family | many-to-many | OL08G00750 OL21G01590 | 2 | |
Tree-based ortholog | 1-to-many | OL08G00750 OL13G01390 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | OL13G01390 OL21G01590 | 2 | ||
Physcomitrella patens | Orthologous gene family | many-to-many | PP00008G00320 PP00074G01070 | 2 | |
Tree-based ortholog | 1-to-many | PP00008G00320 PP00074G01070 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00008G00320 PP00074G01070 | 2 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT08G18810 PT08G18820 PT10G04410 | 3 | |
Tree-based ortholog | 1-to-many | PT10G04410 PT08G18810 | 2 | ||
Anchor point | N/A | PT10G04410 PT08G18810 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT10G04410 | 1 | ||
Prunus persica | Orthologous gene family | many-to-many | PPE_001G25970 PPE_001G57950 | 2 | |
Tree-based ortholog | 1-to-1 | PPE_001G25970 | 1 | ||
Anchor point | N/A | PPE_001G25970 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_001G25970 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-many | RC27504G00090 RC29596G00240 | 2 | |
Tree-based ortholog | 1-to-1 | RC27504G00090 | 1 | ||
Anchor point | N/A | RC27504G00090 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC27504G00090 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-1 | SL05G005020 | 1 | |
Tree-based ortholog | 1-to-1 | SL05G005020 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL05G005020 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-1 | ST05G014130 | 1 | |
Tree-based ortholog | 1-to-1 | ST05G014130 | 1 | ||
Anchor point | N/A | ST05G014130 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST05G014130 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP1G09460 TP7G22430 | 2 | |
Tree-based ortholog | 1-to-1 | TP1G09460 | 1 | ||
Anchor point | N/A | TP1G09460 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP1G09460 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-many | TC0002G25650 TC0008G07110 | 2 | |
Tree-based ortholog | 1-to-1 | TC0002G25650 | 1 | ||
Anchor point | N/A | TC0002G25650 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0002G25650 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-1 | VV01G11770 | 1 | |
Tree-based ortholog | 1-to-1 | VV01G11770 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV01G11770 | 1 | ||
Zea mays | Orthologous gene family | many-to-1 | ZM06G16080 | 1 | |
Tree-based ortholog | 1-to-1 | ZM06G16080 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM06G16080 | 1 |