Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
EG0004G04710
(Eucalyptus grandis)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Eucalyptus grandis | Orthologous gene family | EG0004G04680 EG0004G04690 EG0004G04710 ... | 4 |  |
| Best-Hits-and-Inparalogs(BHI)family | EG0004G04690 EG0004G04710 EG0004G04720 ... | 4 | ||
| Tree-based ortholog | EG0004G04720 EG0004G04710 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ATR_00021G01800 | 1 | |
| Tree-based ortholog | many-to-1 | ATR_00021G01800 | 1 | ||
| Arabidopsis lyrata | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AL7G13310 | 1 | |
| Tree-based ortholog | many-to-1 | AL1G29690 | 1 | ||
| Arabidopsis thaliana | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT4G28500 | 1 | |
| Tree-based ortholog | many-to-1 | AT1G28470 | 1 | ||
| Beta vulgaris | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BV8G05840 | 1 | |
| Tree-based ortholog | many-to-1 | BV8G05840 | 1 | ||
| Brassica rapa | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BR09G17770 | 1 | |
| Tree-based ortholog | many-to-many | BR09G17770 BR07G06840 | 2 | ||
| Capsella rubella | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRU_007G11480 | 1 | |
| Tree-based ortholog | many-to-1 | CRU_001G25880 | 1 | ||
| Carica papaya | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP02586G00010 | 1 | |
| Tree-based ortholog | many-to-1 | CP02586G00010 | 1 | ||
| Citrullus lanatus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL00G02830 | 1 | |
| Tree-based ortholog | many-to-1 | CL03G07690 | 1 | ||
| Citrus sinensis | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS00235G00100 | 1 | |
| Tree-based ortholog | many-to-1 | CS00235G00100 | 1 | ||
| Cucumis melo | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00001G07450 | 1 | |
| Tree-based ortholog | many-to-1 | CM00001G07450 | 1 | ||
| Fragaria vesca | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FV3G13210 | 1 | |
| Tree-based ortholog | many-to-1 | FV3G13210 | 1 | ||
| Glycine max | Best-Hits-and-Inparalogs(BHI)family | many-to-many | GM07G32250 GM13G24320 | 2 | |
| Tree-based ortholog | many-to-many | GM13G30800 GM15G08480 GM07G32250 ... | 4 | ||
| Gossypium raimondii | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GR09G16630 | 1 | |
| Tree-based ortholog | many-to-many | GR09G16630 GR10G15760 | 2 | ||
| Lotus japonicus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | LJ4G010300 | 1 | |
| Tree-based ortholog | many-to-many | LJ6G026900 LJ6G026360 LJ4G010300 | 3 | ||
| Malus domestica | Best-Hits-and-Inparalogs(BHI)family | many-to-many | MD10G023170 MD05G004800 | 2 | |
| Tree-based ortholog | many-to-many | MD05G004800 MD10G023170 | 2 | ||
| Manihot esculenta | Best-Hits-and-Inparalogs(BHI)family | many-to-many | ME04851G00530 ME11784G00030 | 2 | |
| Tree-based ortholog | many-to-many | ME04851G00530 ME11784G00030 | 2 | ||
| Medicago truncatula | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MT4G088245 | 1 | |
| Tree-based ortholog | many-to-many | MT2G014680 MT8G069160 MT4G088245 | 3 | ||
| Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS01G48130 | 1 | |
| Tree-based ortholog | many-to-many | OS05G48850 OS01G48130 | 2 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PP00251G00100 | 1 | |
| Tree-based ortholog | many-to-1 | PP00251G00100 | 1 | ||
| Populus trichocarpa | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PT04G04930 PT11G05840 | 2 | |
| Tree-based ortholog | many-to-many | PT11G05840 PT04G04930 | 2 | ||
| Prunus persica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPE_004G05060 | 1 | |
| Tree-based ortholog | many-to-1 | PPE_004G05060 | 1 | ||
| Ricinus communis | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC30190G00030 | 1 | |
| Tree-based ortholog | many-to-1 | RC30190G00030 | 1 | ||
| Solanum lycopersicum | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL02G077610 | 1 | |
| Tree-based ortholog | many-to-1 | SL02G077610 | 1 | ||
| Solanum tuberosum | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST02G020450 | 1 | |
| Tree-based ortholog | many-to-1 | ST02G020450 | 1 | ||
| Thellungiella parvula | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP1G24720 | 1 | |
| Tree-based ortholog | many-to-1 | TP1G24720 | 1 | ||
| Theobroma cacao | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TC0006G17620 | 1 | |
| Tree-based ortholog | many-to-1 | TC0006G17620 | 1 | ||
| Vitis vinifera | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV10G01470 | 1 | |
| Tree-based ortholog | many-to-1 | VV10G01470 | 1 | ||
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM03G35300 | 1 | |
| Tree-based ortholog | many-to-many | ZM06G31080 ZM03G35300 | 2 |