Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
EG0003G02320
(Eucalyptus grandis)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Eucalyptus grandis | Orthologous gene family | EG0003G02320 EG0006G34500 | 2 |  |
| Tree-based ortholog | EG0003G02320 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | EG0003G02320 EG0006G34500 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00025G02300 | 1 | |
| Tree-based ortholog | 1-to-1 | ATR_00002G00970 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ATR_00025G02300 | 1 | ||
| Arabidopsis lyrata | Tree-based ortholog | 1-to-1 | AL4G11500 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AL7G10390 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | many-to-1 | AT1G16800 | 1 | |
| Tree-based ortholog | 1-to-many | AT4G31180 AT4G26870 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT1G16800 | 1 | ||
| Beta vulgaris | Orthologous gene family | many-to-1 | BV0G40320 | 1 | |
| Tree-based ortholog | 1-to-1 | BV3G14700 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BV0G40320 | 1 | ||
| Brassica rapa | Orthologous gene family | many-to-1 | BR09G46990 | 1 | |
| Tree-based ortholog | 1-to-1 | BR09G34820 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BR09G46990 | 1 | ||
| Capsella rubella | Orthologous gene family | many-to-1 | CRU_001G15790 | 1 | |
| Tree-based ortholog | 1-to-1 | CRU_007G09450 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRU_001G15790 | 1 | ||
| Carica papaya | Orthologous gene family | many-to-many | CP00176G00080 CP00176G00090 | 2 | |
| Tree-based ortholog | 1-to-1 | CP00037G01900 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00176G00080 | 1 | ||
| Chlamydomonas reinhardtii | Tree-based ortholog | 1-to-1 | CR06G08800 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR06G08800 | 1 | ||
| Citrullus lanatus | Orthologous gene family | many-to-many | CL09G01420 CL09G01430 | 2 | |
| Tree-based ortholog | 1-to-1 | CL05G18450 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL09G01420 | 1 | ||
| Citrus sinensis | Tree-based ortholog | 1-to-many | CS00328G00210 CS07474G00010 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS00431G00030 | 1 | ||
| Cucumis melo | Orthologous gene family | many-to-many | CM00067G00560 CM00067G00570 | 2 | |
| Tree-based ortholog | 1-to-1 | CM01596G03670 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM01596G03670 | 1 | ||
| Fragaria vesca | Orthologous gene family | many-to-1 | FV0G17940 | 1 | |
| Tree-based ortholog | 1-to-many | FV6G29620 FV2G11070 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FV0G17940 | 1 | ||
| Glycine max | Orthologous gene family | many-to-1 | GM15G00301 | 1 | |
| Tree-based ortholog | 1-to-many | GM14G11711 GM17G34070 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GM15G00301 | 1 | ||
| Gossypium raimondii | Orthologous gene family | many-to-1 | GR10G14160 | 1 | |
| Tree-based ortholog | 1-to-1 | GR01G00130 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GR10G14160 | 1 | ||
| Lotus japonicus | Tree-based ortholog | 1-to-1 | LJ5G006440 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | LJ5G006440 | 1 | ||
| Malus domestica | Orthologous gene family | many-to-1 | MD17G014650 | 1 | |
| Tree-based ortholog | 1-to-many | MD00G059470 MD05G010870 MD00G197360 ... | 10 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MD17G014650 | 1 | ||
| Manihot esculenta | Orthologous gene family | many-to-1 | ME06556G00130 | 1 | |
| Tree-based ortholog | 1-to-many | ME11897G00170 ME09788G00150 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ME06556G00130 | 1 | ||
| Medicago truncatula | Orthologous gene family | many-to-1 | MT2G105760 | 1 | |
| Tree-based ortholog | 1-to-1 | MT1G014140 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MT2G105760 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS09G32180 | 1 | |
| Tree-based ortholog | 1-to-many | OS02G46130 OS02G04700 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS09G32180 | 1 | ||
| Ostreococcus lucimarinus | Tree-based ortholog | 1-to-1 | OL11G02630 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL11G02630 | 1 | ||
| Physcomitrella patens | Orthologous gene family | many-to-1 | PP00120G00490 | 1 | |
| Tree-based ortholog | 1-to-1 | PP00235G00480 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PP00330G00030 | 1 | ||
| Populus trichocarpa | Orthologous gene family | many-to-1 | PT10G25370 | 1 | |
| Tree-based ortholog | 1-to-1 | PT06G08540 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PT10G25370 | 1 | ||
| Prunus persica | Orthologous gene family | many-to-1 | PPE_003G01110 | 1 | |
| Tree-based ortholog | 1-to-1 | PPE_004G13480 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPE_003G01110 | 1 | ||
| Ricinus communis | Orthologous gene family | many-to-1 | RC30169G00270 | 1 | |
| Tree-based ortholog | 1-to-1 | RC29910G00170 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC29910G00170 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-many | SL03G124000 SL03G124010 | 2 | |
| Tree-based ortholog | 1-to-1 | SL05G056250 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL03G124000 | 1 | ||
| Solanum tuberosum | Orthologous gene family | many-to-many | ST03G033880 ST03G033890 | 2 | |
| Tree-based ortholog | 1-to-1 | ST05G029450 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST03G033890 | 1 | ||
| Thellungiella parvula | Orthologous gene family | many-to-1 | TP1G14940 | 1 | |
| Tree-based ortholog | 1-to-1 | TP7G29070 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP1G14940 | 1 | ||
| Theobroma cacao | Orthologous gene family | many-to-1 | TC0006G05490 | 1 | |
| Tree-based ortholog | 1-to-many | TC0002G02290 TC0009G00080 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TC0006G05490 | 1 | ||
| Vitis vinifera | Tree-based ortholog | 1-to-1 | VV04G09880 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV09G09710 | 1 | ||
| Zea mays | Orthologous gene family | many-to-1 | ZM07G18250 | 1 | |
| Tree-based ortholog | 1-to-many | ZM05G18780 ZM08G06160 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | ZM08G06160 ZM05G18780 | 2 |