Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
EG0002G24790
(Eucalyptus grandis)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Eucalyptus grandis | Orthologous gene family | EG0002G24790 EG0007G17800 | 2 |  |
| Tree-based ortholog | EG0007G17800 EG0002G24790 | 2 | ||
| Anchor point | EG0010G13140 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | EG0002G24790 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Tree-based ortholog | many-to-1 | ATR_00002G00640 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00002G00640 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | many-to-1 | AL1G14020 | 1 | |
| Tree-based ortholog | many-to-1 | AL1G14020 | 1 | ||
| Anchor point | 1-to-1 | AL1G14020 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL1G14020 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | many-to-1 | AT1G13340 | 1 | |
| Tree-based ortholog | many-to-1 | AT1G13340 | 1 | ||
| Anchor point | 1-to-1 | AT1G13340 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT1G13340 | 1 | ||
| Beta vulgaris | Orthologous gene family | many-to-1 | BV6G00480 | 1 | |
| Tree-based ortholog | many-to-1 | BV6G00480 | 1 | ||
| Anchor point | 1-to-1 | BV6G00480 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV6G00480 | 1 | ||
| Brassica rapa | Orthologous gene family | many-to-1 | BR06G07890 | 1 | |
| Tree-based ortholog | many-to-1 | BR06G07890 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR08G27810 | 1 | ||
| Capsella rubella | Orthologous gene family | many-to-1 | CRU_001G12460 | 1 | |
| Tree-based ortholog | many-to-1 | CRU_001G12460 | 1 | ||
| Anchor point | 1-to-1 | CRU_001G12460 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_001G12460 | 1 | ||
| Carica papaya | Orthologous gene family | many-to-1 | CP00001G01860 | 1 | |
| Tree-based ortholog | many-to-1 | CP00001G01860 | 1 | ||
| Anchor point | 1-to-1 | CP00001G01860 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00001G01860 | 1 | ||
| Chlamydomonas reinhardtii | Tree-based ortholog | many-to-1 | CR10G03920 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR10G03920 | 1 | ||
| Citrullus lanatus | Orthologous gene family | many-to-1 | CL05G23910 | 1 | |
| Tree-based ortholog | many-to-many | CL05G23910 CL08G02620 | 2 | ||
| Anchor point | 1-to-many | CL05G23910 CL08G02590 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL05G23910 | 1 | ||
| Citrus sinensis | Tree-based ortholog | many-to-1 | CS00019G00480 | 1 | |
| Anchor point | 1-to-many | CS00019G00480 CS00071G00520 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00071G00520 | 1 | ||
| Cucumis melo | Orthologous gene family | many-to-1 | CM00016G05670 | 1 | |
| Tree-based ortholog | many-to-many | CM00016G05670 CM00015G00570 | 2 | ||
| Anchor point | 1-to-1 | CM00016G05670 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00016G05670 | 1 | ||
| Fragaria vesca | Tree-based ortholog | many-to-1 | FV0G01890 | 1 | |
| Anchor point | 1-to-many | FV0G01890 FV0G01540 FV6G40670 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV0G01890 | 1 | ||
| Glycine max | Orthologous gene family | many-to-many | GM01G20860 GM08G29470 | 2 | |
| Tree-based ortholog | many-to-many | GM01G20860 GM08G29470 | 2 | ||
| Anchor point | 1-to-1 | GM01G20860 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM08G29470 GM01G20860 | 2 | ||
| Gossypium raimondii | Orthologous gene family | many-to-many | GR05G13840 GR13G08160 | 2 | |
| Tree-based ortholog | many-to-many | GR13G08160 GR05G13840 | 2 | ||
| Anchor point | 1-to-1 | GR13G08160 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR05G13840 | 1 | ||
| Lotus japonicus | Orthologous gene family | many-to-1 | LJ2G018540 | 1 | |
| Tree-based ortholog | many-to-1 | LJ2G018540 | 1 | ||
| Anchor point | 1-to-many | LJ2G018540 LJ1G041180 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ2G018540 | 1 | ||
| Malus domestica | Orthologous gene family | many-to-1 | MD16G001840 | 1 | |
| Tree-based ortholog | many-to-many | MD16G001840 MD00G433420 | 2 | ||
| Anchor point | 1-to-1 | MD16G001840 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD16G001840 | 1 | ||
| Manihot esculenta | Orthologous gene family | many-to-1 | ME06005G00220 | 1 | |
| Tree-based ortholog | many-to-1 | ME06005G00220 | 1 | ||
| Anchor point | 1-to-many | ME06005G00220 ME06871G00740 ME04043G00940 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME04043G00960 | 1 | ||
| Medicago truncatula | Orthologous gene family | many-to-1 | MT1G111210 | 1 | |
| Tree-based ortholog | many-to-1 | MT1G111210 | 1 | ||
| Anchor point | 1-to-1 | MT1G111210 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT1G111210 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS03G50210 | 1 | |
| Tree-based ortholog | many-to-many | OS03G15230 OS03G15220 OS03G15210 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS03G50210 | 1 | ||
| Ostreococcus lucimarinus | Tree-based ortholog | many-to-1 | OL03G01580 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL03G01580 | 1 | ||
| Physcomitrella patens | Tree-based ortholog | many-to-many | PP00079G00210 PP00030G00310 PP00043G00230 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00079G00210 PP00030G00310 | 2 | ||
| Populus trichocarpa | Orthologous gene family | many-to-1 | PT10G12700 | 1 | |
| Tree-based ortholog | many-to-1 | PT10G12700 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT10G12700 | 1 | ||
| Prunus persica | Orthologous gene family | many-to-1 | PPE_001G31820 | 1 | |
| Tree-based ortholog | many-to-1 | PPE_001G31820 | 1 | ||
| Anchor point | 1-to-many | PPE_003G21560 PPE_001G31820 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_001G31820 | 1 | ||
| Ricinus communis | Orthologous gene family | many-to-1 | RC28883G00130 | 1 | |
| Tree-based ortholog | many-to-1 | RC28883G00130 | 1 | ||
| Anchor point | 1-to-1 | RC28883G00130 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC28883G00130 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-1 | SL05G009550 | 1 | |
| Tree-based ortholog | many-to-1 | SL05G009550 | 1 | ||
| Anchor point | 1-to-many | SL04G007230 SL05G009550 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL05G009550 | 1 | ||
| Solanum tuberosum | Orthologous gene family | many-to-1 | ST05G007770 | 1 | |
| Tree-based ortholog | many-to-1 | ST05G007770 | 1 | ||
| Anchor point | 1-to-1 | ST05G007770 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST05G007770 | 1 | ||
| Thellungiella parvula | Orthologous gene family | many-to-1 | TP1G11850 | 1 | |
| Tree-based ortholog | many-to-1 | TP1G11850 | 1 | ||
| Anchor point | 1-to-1 | TP1G11850 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP1G11850 | 1 | ||
| Theobroma cacao | Orthologous gene family | many-to-1 | TC0002G35540 | 1 | |
| Tree-based ortholog | many-to-1 | TC0002G35540 | 1 | ||
| Anchor point | 1-to-many | TC0002G35540 TC0004G14160 TC0002G22760 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0002G35540 | 1 | ||
| Vitis vinifera | Orthologous gene family | many-to-1 | VV01G07950 | 1 | |
| Tree-based ortholog | many-to-1 | VV01G07950 | 1 | ||
| Anchor point | 1-to-1 | VV01G07950 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV01G07950 | 1 | ||
| Zea mays | Orthologous gene family | many-to-1 | ZM01G50410 | 1 | |
| Tree-based ortholog | many-to-many | ZM01G10240 ZM09G24400 ZM09G24390 ... | 10 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM01G50410 | 1 |